Cullins are members of a family of scaffold proteins that assemble multisubunit ubiquitin ligase complexes to confer substrate specificity for the ubiquitination pathway. Cullin3 (Cul3) forms a catalytically inactive BTB-Cul3-Rbx1 (BCR) ubiquitin ligase, which becomes functional upon covalent attachment of the ubiquitin homologue neural-precursor-cellexpressed and developmentally down regulated 8 (Nedd8) near the C terminus of Cul3. Current models suggest that Nedd8 activates cullin complexes by providing a recognition site for a ubiquitin-conjugating enzyme. Based on the following evidence, we propose that Nedd8 activates the BCR ubiquitin ligase by mediating the dimerization of Cul3. First, Cul3 is found as a neddylated heterodimer bound to a BTB domain-containing protein in vivo. Second, the formation of a Cul3 heterodimer is mediated by a Nedd8 molecule, which covalently attaches itself to one Cul3 molecule and binds to the winged-helix B domain at the C terminus of the second Cul3 molecule. Third, complementation experiments revealed that coexpression of two distinct nonfunctional Cul3 mutants can rescue the ubiquitin ligase function of the BCR complex. Likewise, a substrate of the BCR complex binds heterodimeric Cul3, suggesting that the Cul3 complex is active as a dimer. These findings not only provide insight into the architecture of the active BCR complex but also suggest assembly as a regulatory mechanism for activation of all cullin-based ubiquitin ligases.
INTRODUCTIONThe conjugation of ubiquitin to a lysine residue of a target protein serves as a signaling mechanism in many biological processes, such as protein trafficking, DNA repair, protein-protein interactions, and proteolysis (Hershko and Ciechanover, 1998;Pines and Lindon, 2005). These ubiquitin linkages are formed by a series of enzymes designated as ubiquitin-activating enzymes (E1), ubiquitin-conjugating enzymes (E2), and ubiquitin ligases (E3) (Ciechanover et al., 1980). A catalytically active ubiquitin ligase directly transfers ubiquitin molecules to the selected protein substrate, where a noncatalytic ubiquitin ligase shuttles the recruited substrate to a ubiquitin-conjugating enzyme (Glickman and Cienchanover, 2002). This latter group of E3 ligases includes cullin-based ubiquitin ligases, in which the cullin acts as a scaffold for the assembly of a multisubunit ubiquitin ligase complex that contains a RINGbox protein and a cullin-specific substrate adaptor protein (Ohta et al., 1999;Petroski and Deshaies, 2005). Cullin3 (Cul3) forms a complex called the BTB-Cul3-Rbx1 (BCR) ubiquitin ligase, which controls the degradation of several proteins, including cyclin E, the meiotic spindle-formation factor Mei-1, the transcription factor Nrf2, the Ci/Gli transcription factor, and the Dishevelled protein in the Wnt-â€-catenin pathway (Singer et al., 1999;Pintard et al., 2003b;Zhang et al., 2004Zhang et al., , 2006Angers et al., 2006). The BCR complex acquires its substrate specificity through a BTB domaincontaining protein bound at the N terminus ...