When teaching a complex sequence, the sequence is often chunked into components; however, this strategy may not always benefit learning, but may be detrimental. The hypothesis is that this occurs because chunking deprives learners of compound cues that could aid recall. To test this, participants learned 9-item movement sequences, either as three 3-item chunks or as one 9-item series. To undermine compound cueing, some sequences had several movements in common. Learning a sequence in chunks impaired motor skill acquisition only when participants could have exploited compound cues; it also led participants to adopt an alternative recall strategy, which transferred to novel sequences even though this was detrimental to recall.