The decrease in the number of CD4 ϩ T cells during HIV infection is the result of both peripheral destruction of cells by the virus and inadequate replacement of these cells. Aging and HIV infection lead to lower production of new T cells by the thymus, and, therefore, a complete restoration of the immune system is not generally achieved in infected adults after antiretroviral therapy. Because children have a completely functional thymus, we addressed the effects of HIV-1 infection on the production of new T cells in vertically infected children and whether the decrease of viral load after therapy results in a restoration of thymic function. To analyze the thymic function, T-cell receptor rearrangement excision circles were measured by quantitative PCR. Our results indicate that HIV-infected children have lower T-cell receptor rearrangement excision circle levels than age-matched uninfected children, likely due to an inhibitory effect of HIV on thymic function. Additionally, in some patients, the decrease in viral load after retroviral therapy allows the generation of new T cells by the thymus, thus recovering the normal number of CD4 cells.
Depletion of CD4ϩ T cells is a hallmark of HIV infection (1). Experiments using human fetal thymus tissue implanted into SCID mice demonstrated that HIV can infect human thymocytes, leading to their death (2, 3). Therefore, the decrease in CD4 ϩ T cells in HIV-infected persons would be the result of two factors: peripheral CD4 ϩ T-cell depletion by the virus and insufficient replacement of the destroyed T cells (1).The thymus, the organ responsible for the maturation and selection of T cells, undergoes involution with age. It retains, however, a reduced ability to produce new T cells in adults (4). This thymic involution with age could be responsible for the rapid progression of HIV infection in older adults because of the difficulty of generating new T cells to replace CD4 ϩ T cells destroyed by the virus (5). In contrast, children have complete thymic function and, therefore, they have the capacity to regenerate all of the T-cell clones lost due to HIV infection, leading to a complete reconstitution of the immune system. Because T cells can have a very long life span, it is difficult to discriminate whether the "naive" T cells present in an individual are recently produced by the thymus or whether they arose from the division of cells formed in the first stages of life. Recently, Douek et al. (4) developed an assay that allows discrimination of the T cells of recent formation in the thymus from those of periphery expansion. This new assay was based on the mechanism by which the repertoire of the TCR is generated. In the genetic rearrangement of the regions V, D, and J that produce the ␣ TCR (6), the deletion of the TCRD locus forms some circles of DNA-denominated signal joint TREC (7,8). These circles are episomal and do not replicate during mitosis. Thus, TREC will be present only in recently produced cells by the thymus and not in those derived from the division or di...