“…Evaluation of the composition of post-COVID BAL by scRNAseq revealed that macrophages dominated in all subjects, with smaller T cell, NK T cell, dendritic cell, epithelial and B cell populations also identified (Figure 1b-d and Supplementary Figure 1a-d). Each of the cell types expressed high levels of independently established marker genes (Adams et al, 2020; Cheng et al, 2021; David et al, 2021; Davies et al, 2013; Davis and Wypych, 2021; Gardell and Parker, 2017; Glass et al, 2020; Murray and Wynn, 2011; Tsyklauri et al, 2023; van Aalderen et al, 2021; Villani et al, 2017), validating our annotations (Figure 1d). The notable difference between the two phenotypes was significantly higher abundance of CD4 T cells and CD8 T cells in inflammatory PCLD (Figure 1e).…”