Abstract:In this paper, we show that DNA added to mouse L cells by the calcium phosphate method can be inserted into the genome of those cells by homologous recombination. The insertion event is detected because it reconstructs a functional thymidine kinase (tk) gene from two defective genes that share 320 base pairs of homology. One of the genes is missing its 5' portion (tkA5') and is in the cell's chromosome, and the other is missing its 3' portion (tkA3') and is in the introduced DNA. 40 (6, 7, 9) indicates that … Show more
“…Since site-specific integration of genes appears to be extremely rare (8,16,17), it would be of interest to determine whether genetic mutations can be corrected by gene conversion from segments of DNA introduced artificially elsewhere into the genome. We are also exploring whether gene conversion can be used as a mechanism to exchange genetic information between replicating extrachromosomal molecules and the chromosomes of mammalian cells.…”
We constructed substrates to study gene conversion in mammalian cells specifically without the complication of reciprocal recombination events. These substrates contain both an insertion mutation of the neomycin resistance gene (neoX) and an internal, homologous fragment of the neo gene (neo-526), such that gene conversion from neo-526 to neoX restores a functional neo gene. Although two reciprocal recombination events can also produce an intact neo gene, these double recombination events occur much less frequently that gene conversion in mammalian cells, We used our substrates to characterize extrachromosomal gene conversion in recombination-deficient bacteria and in monkey COS cells. Chromosomal recombination was also studied after stable integration of these substrates into the genome of mouse 3T6 cells. All extrachromosomal and chromosomal recombination events analyzed in mammalian cells resulted from gene conversion. Chromosomal gene conversion events occurred at frequencies of about 10(-6) per cell generation and restored a functional neo gene without overall effects on sequence organization.
“…Since site-specific integration of genes appears to be extremely rare (8,16,17), it would be of interest to determine whether genetic mutations can be corrected by gene conversion from segments of DNA introduced artificially elsewhere into the genome. We are also exploring whether gene conversion can be used as a mechanism to exchange genetic information between replicating extrachromosomal molecules and the chromosomes of mammalian cells.…”
We constructed substrates to study gene conversion in mammalian cells specifically without the complication of reciprocal recombination events. These substrates contain both an insertion mutation of the neomycin resistance gene (neoX) and an internal, homologous fragment of the neo gene (neo-526), such that gene conversion from neo-526 to neoX restores a functional neo gene. Although two reciprocal recombination events can also produce an intact neo gene, these double recombination events occur much less frequently that gene conversion in mammalian cells, We used our substrates to characterize extrachromosomal gene conversion in recombination-deficient bacteria and in monkey COS cells. Chromosomal recombination was also studied after stable integration of these substrates into the genome of mouse 3T6 cells. All extrachromosomal and chromosomal recombination events analyzed in mammalian cells resulted from gene conversion. Chromosomal gene conversion events occurred at frequencies of about 10(-6) per cell generation and restored a functional neo gene without overall effects on sequence organization.
“…The reasons for this are not known, but the effect seems to exist. For example, separate studies were conducted by Lin et al [25] and Thomas et al [42] both involving gene targeting of artificially introduced defective genes in mouse fibroblasts. Lin et al reported a ratio of random integration to gene targeting of 100 000:1 whereas Thomas et al reported a ratio of 100:1.…”
“…In yeast, DSB repair occurs largely by homologous recombination (4)(5)(6)(7). Although capable of homologous recombination, higher eukaryotic species repair DSBs primarily by a process of nonhomologous or illegitimate recombination (8)(9)(10)(11)(12)(13).…”
The DNA-dependent protein kinase (DNA-PK) is required for DNA double-strand break (DSB) repair and immunoglobulin gene rearrangement and may play a role in the regulation of transcription. The DNA-PK holoenzyme is composed of three polypeptide subunits: the DNA binding Ku70͞86 heterodimer and an Ϸ460-kDa catalytic subunit (DNA-PKcs). DNA-PK has been hypothesized to assemble at DNA DSBs and play structural as well as signal transduction roles in DSB repair. Recent advances in atomic force microscopy (AFM) have resulted in a technology capable of producing high resolution images of native protein and proteinnucleic acid complexes without staining or metal coating. The AFM provides a rapid and direct means of probing the protein-nucleic acid interactions responsible for DNA repair and genetic regulation. Here we have employed AFM as well as electron microscopy to visualize Ku and DNA-PK in association with DNA. A significant number of DNA molecules formed loops in the presence of Ku. DNA looping appeared to be sequence-independent and unaffected by the presence of DNA-PKcs. Gel filtration of Ku in the absence and the presence of DNA indicates that Ku does not form nonspecific aggregates. We conclude that, when bound to DNA, Ku is capable of self-association. These findings suggest that Ku binding at DNA DSBs will result in Ku self-association and a physical tethering of the broken DNA strands.
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