Real-time examination of aminoglycoside activity towards bacterial mimetic membranes using Quartz Crystal Microbalance with Dissipation monitoring (QCM-D)
Abstract:The rapid increase in multi-drug resistant bacteria has resulted in previously discontinued treatments being revisited. Aminoglycosides are effective "old" antibacterial agents that fall within this category. Despite extensive usage and understanding of their intracellular targets, there is limited mechanistic knowledge regarding how aminoglycosides penetrate bacterial membranes. Thus, the activity of two well-known aminoglycosides, kanamycin A and neomycin B, towards a bacterial mimetic membrane (DMPC:DMPG (4… Show more
“…QCM-D has been used extensively to study antimicrobial peptide interaction with model membranes due to unique insights it provides into structural/conformational information of membrane-peptide complexes425758. However, these studies were performed on simple artificial bilayers composed of phospholipids like POPC/DOPC, or biomimetic bilayers mimicking bacterial inner membrane (IM).…”
The bacterial outer membrane (OM) is a barrier containing membrane proteins and liposaccharides that fulfill crucial functions for Gram-negative bacteria. With the advent of drug-resistant bacteria, it is necessary to understand the functional role of this membrane and its constituents to enable novel drug designs. Here we report a simple method to form an OM-like supported bilayer (OM-SB), which incorporates native lipids and membrane proteins of gram-negative bacteria from outer membrane vesicles (OMVs). We characterize the formation of OM-SBs using quartz crystal microbalance with dissipation (QCM-D) and fluorescence microscopy. We show that the orientation of proteins in the OM-SB matches the native bacterial membrane, preserving the characteristic asymmetry of these membranes. As a demonstration of the utility of the OM-SB platform, we quantitatively measure antibiotic interactions between OM-SBs and polymyxin B, a cationic peptide used to treat Gram-negative infections. This data enriches understanding of the antibacterial mechanism of polymyxin B, including disruption kinetics and changes in membrane mechanical properties. Combining OM-SBs with microfluidics will enable higher throughput screening of antibiotics. With a broader view, we envision that a molecularly complete membrane-scaffold could be useful for cell-free applications employing engineered membrane proteins in bacterial membranes for myriad technological purposes.
“…QCM-D has been used extensively to study antimicrobial peptide interaction with model membranes due to unique insights it provides into structural/conformational information of membrane-peptide complexes425758. However, these studies were performed on simple artificial bilayers composed of phospholipids like POPC/DOPC, or biomimetic bilayers mimicking bacterial inner membrane (IM).…”
The bacterial outer membrane (OM) is a barrier containing membrane proteins and liposaccharides that fulfill crucial functions for Gram-negative bacteria. With the advent of drug-resistant bacteria, it is necessary to understand the functional role of this membrane and its constituents to enable novel drug designs. Here we report a simple method to form an OM-like supported bilayer (OM-SB), which incorporates native lipids and membrane proteins of gram-negative bacteria from outer membrane vesicles (OMVs). We characterize the formation of OM-SBs using quartz crystal microbalance with dissipation (QCM-D) and fluorescence microscopy. We show that the orientation of proteins in the OM-SB matches the native bacterial membrane, preserving the characteristic asymmetry of these membranes. As a demonstration of the utility of the OM-SB platform, we quantitatively measure antibiotic interactions between OM-SBs and polymyxin B, a cationic peptide used to treat Gram-negative infections. This data enriches understanding of the antibacterial mechanism of polymyxin B, including disruption kinetics and changes in membrane mechanical properties. Combining OM-SBs with microfluidics will enable higher throughput screening of antibiotics. With a broader view, we envision that a molecularly complete membrane-scaffold could be useful for cell-free applications employing engineered membrane proteins in bacterial membranes for myriad technological purposes.
“…In eukaryotes, cardiolipin is nearly exclusively found in the inner membranes of mitochondria, 60 where many vital events, such as intracellular calcium storage, oxidative phosphorylation and apoptosis, take place. 63 To the mitochondrial function of calcium storage, the weak [Ca 2+ ] dependence of the phase preference of cardiolipin can be beneficial: it attenuates the usually strong nonlamellar-forming propensities of anionic phospholipids at high local [Ca 2+ ] (retaining high local [Ca 2+ ] is important to mitochondrial functioning, as reviewed in ref. 63 To the mitochondrial function of calcium storage, the weak [Ca 2+ ] dependence of the phase preference of cardiolipin can be beneficial: it attenuates the usually strong nonlamellar-forming propensities of anionic phospholipids at high local [Ca 2+ ] (retaining high local [Ca 2+ ] is important to mitochondrial functioning, as reviewed in ref.…”
Biomembranes assume nonlamellar structures in many cellular events, with the tendency of forming a nonlamellar structure quantified by the monolayer spontaneous curvature, C(0), and with many of these events involving the acts of Ca(2+). Despite this biologically important intimacy, how C(0) is affected by [Ca(2+)] is unknown. In this study, we use the X-ray diffraction technique and the reconstruction of electron density profiles to measure the C(0)s of a zwitterionic phospholipid, DOPE, and two anionic phospholipids, DOPA and 18 : 1 (9Z) cardiolipin, at temperatures from 20 °C to 40 °C and [Ca(2+)]s from 0 mM to 100 mM; these phospholipids are chosen to examine the contributions of the electric charge density per molecule. While showing a strong dependence on temperature, C(0,DOPE) is nearly independent of [Ca(2+)]. In contrast, C(0,DOPA) and C(0),cardiolipin are almost unresponsive to the temperature change but affected by the [Ca(2+)] variation; and C(0,DOPA) varies with [Ca(2+)] ∼1.5 times more strongly than C(0,cardiolipin), with the phase preferences of DOPA and cardiolipin shifting to the H(II) phase and remaining on the Lα phase, respectively, at [Ca(2+)] = 100 mM. From these observations, we reveal the effects of modulating the strength of the inter-headgroup repulsion and discuss the mechanisms underlying the phase behaviour and cellular functions of the investigated phospholipids. Most importantly, this study recognizes that the headgroup charge density is dominant in dictating the phase behaviour of the anionic phospholipids, and that the unique molecular characteristics of cardiolipin are critically needed both for maintaining the structural integrity of cardiolipin-rich biomembranes and for fulfilling the biological roles of the phospholipid.
“…50 This approach is widely used by numerous groups to study membrane interactions 33,47,48,61 and complements our previously studied effects of aminoglycosides on bacterial membranes. 28 The QCM-D technique measures changes in frequency (Δf) and dissipation (ΔD) of a quartz crystal sensor. A decrease in frequency (Δf ) is correlated with an increase in mass (Δm) while an increase in dissipation (ΔD) refers to a softer and less rigid surface structure.…”
Section: Resultsmentioning
confidence: 99%
“…26,27 A disruptive effect of aminoglycosides towards bacterial mimetic membranes has already been demonstrated leading to its antibiotic activity. 28 Several multidrug-resistant bacteria, such as methicillinresistant Staphylococcus aureus (MRSA), invade mammalian cells. 29 Hence, potential drugs need to be able to penetrate mammalian membranes to target intracellular bacterial infections.…”
The increase in bacterial and viral resistance to current therapeutics has led to intensive research for new antibacterial and antiviral agents. Among these, aminoglycosides and their guanidino derivatives are potent candidates targeting specific RNA sequences. It is necessary that these substances can pass across mammalian membranes in order to reach their intracellular targets. This study investigated the effects of the aminoglycosides kanamycin A and neomycin B and their guanidino derivatives on mammalian mimetic membranes using a quartz crystal microbalance with dissipation monitoring (QCM-D). Lipid bilayers as membrane models were deposited onto gold coated quartz crystals and aminoglycosides added afterwards. Notably, the guanidino derivatives exhibited an initial stiffening of the membrane layer indicating a quick insertion of the planar guanidino groups into the membrane. The guanidino derivatives also reached their maximum binding to the membrane at lower concentrations than the native compounds. Therefore, these modified aminoglycosides are promising agents for the development of new antimicrobial treatments.
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