In premenopausal women, the most severe menstrual dysfunction is amenorrhea and is associated with chronic hypoestrogenism. In postmenopausal women, the coincident hypoestrogenism observed is associated with a number of clinical sequelae related to cardiovascular health. Due to an observed cardioprotective effect of E2, persistently low E2 levels in amenorrheic (AM) athletes may confer deleterious effects on cardiovascular health.The incidence of amenorrhea among athletes is much greater than that observed among sedentary women. Recent data in AM athletes demonstrate impaired endothelial function, elevated low-and high-density lipoprotein levels, reduced circulating nitrates and nitrites, and increased susceptibility to lipid peroxidation. An improvement in endothelial function has also been reported during the recovery of menstrual cyclicity in a small sample of previously AM athletes. Although no longitudinal studies exist, these findings are suggestive of increased risk of premature cardiovascular disease in AM athletes. These issues are explored and discussed in detail in this comprehensive review paper. Future research should focus on the presentation and progression of these adverse cardiovascular parameters in physically active women and athletes with hypoestrogenism to determine their effect on long-term health outcomes.