24Population genetic approaches are often used to investigate dispersal patterns of species living in highly 25 urbanized environment in order to improve management strategies for biodiversity conservation or pest 26 control. However, in such environment, population genetic structure may reflect both current features of 27 the cityscape and urbanization history. This can be especially relevant when focusing on non-native 28 invasive commensal rodents that have been introduced in numerous primary colonial European 29 settlements. Accounting for spatial and temporal cityscape heterogeneity to determine how past and 30 recent demographic events may interplay to shape current population genetic structure of synanthropic 31 rodents may provide useful insights to manage their populations. In this study, we addressed these issues 32 by focusing on the house mouse, Mus musculus domesticus, in Dakar, Senegal, where the species may 33 have been introduced as soon as Europeans settled in the middle of the nineteenth century. We examined 34 genetic variation at one mitochondrial locus and 15 nuclear microsatellite markers from individuals 35 sampled in 14 sampling sites representing different stages of urbanization history and different socio-36 economic environments in Dakar. We used various approaches, including model-based genetic clustering 37 and model-free smoothing of pairwise genetic estimates. We further linked observed spatial genetic 38 patterns to historical and current features of Dakar cityscape using random forest and Bayesian 39 conditional autoregressive models. Results are consistent with an introduction of the house mouse at 40 colonial time and current genetic structure reflects the interplay between the historical dynamics of 41 urbanization and the variation of contemporary urban habitats, including socio-economic features, that 42 translate in habitat quality for the house mouse. Our results highlight the potential importance of 43 accounting for past demographic events to understand spatial genetic patterns of non-native invasive 44 commensal rodents in highly urbanized environment.45 46