2,2,2-Trichloroethanol
(TCE) is the active form of the sedative
hypnotic drug chloral hydrate, one of the oldest sleep medications
in the market. Understanding of TCE’s action mechanisms to
its many targets, particularly within the ion channel family, could
benefit from the state-of-the-art computational molecular studies.
In this direction, we employed de novo modeling aided by the force
field toolkit to develop CHARMM36-compatible TCE parameters. The classical
potential energy function was calibrated targeting molecular conformations,
local interactions with water molecules, and liquid bulk properties.
Reference data comes from both tabulated thermodynamic properties
and ab initio calculations at the MP2 level. TCE solvation free energy
calculations in water and oil reproduce a lipophilic, yet nonhydrophobic,
behavior. Indeed, the potential mean force profile for TCE partition
through the phospholipid bilayer reveals the sedative’s preference
for the interfacial region. The calculated partition coefficient also
matches experimental measures. Further validation of the proposed
parameters is supported by the model’s ability to recapitulate
quenching experiments demonstrating TCE binding to bovine serum albumin.