mInteraction between the guanine-cytosine base pair and the episulfonium form of sulfur mustard (HDf) or the aziridinium form of nitrogen mustard (HN2+) was studied using the ab initio LCAO-MO method at the HF/6-31G level. The alkylation mechanism on the guanine N7 was analyzed by using a supermolecular modeling. Our stereostructural results associated with the molecular electrostatic potentials and highest occupied/lowest unoccupied molecular orbital (HOMO-LUMO) properties show that in vacuum the alkylation of the N7 of guanine by HDt in the agressive episulfonium form is a direct process without a transition state and of which the pathway is determined. Our study shows that interaction of guanine with the aziridinium form of HN2+ necessitates a transition state for the N7 alkylation route. When the N7 guanine alkylation by HD+ or HN2' is achieved, about half of a positive charge moves from the alkylator toward the guanine in both cases. 0 1996 John Wiley & Sons, Inc.