2009
DOI: 10.1007/s10529-009-9928-1
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Quantitative identification of teratoma tissues formed by human embryonic stem cells with TeratomEye

Abstract: An automated vision system, TeratomEye, was developed for the identification of three representative tissue types: muscle, gut and neural epithelia which are commonly found in teratomas formed from human embryonic stem cells. Muscle tissue, a common structure was identified with an accuracy of 90.3% with high specificity and sensitivity greater than 90%. Gut epithelia were identified with an accuracy of 87.5% with specificity and sensitivity greater than 80%. Neural epithelia which were the most difficult stru… Show more

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Cited by 8 publications
(8 citation statements)
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“…After 3-4 weeks, the tumors were removed, fixed in 4 % formalin, and embedded in paraffin. The histology of in vivo differentiated three germ layers -respiratory (endoderm), cartilage (mesoderm), and neural rosettes (ectoderm) -was analyzed after hematoxylin and eosin staining [46,47].…”
Section: Pluripotency Analysis After Differentiation In Vitro and In mentioning
confidence: 99%
“…After 3-4 weeks, the tumors were removed, fixed in 4 % formalin, and embedded in paraffin. The histology of in vivo differentiated three germ layers -respiratory (endoderm), cartilage (mesoderm), and neural rosettes (ectoderm) -was analyzed after hematoxylin and eosin staining [46,47].…”
Section: Pluripotency Analysis After Differentiation In Vitro and In mentioning
confidence: 99%
“…Qualitative analyses such as these are more subjective by nature and coupled with the variable and haphazard nature of the EBs/teratomas, these qualitative analyses can only really be used to ascertain trends in differentiation rather than directly comparing the strength of differentiation. While some attempts to more quantitatively assess the histology of teratomas have been made ( Oh et al, 2009 ; Bhagavatula et al, 2010 ), ultimately quantitative gene expression analyses will provide more objective data as to the strength of differentiation. These simple morphogen studies lay the foundations for more nuanced differentiation experiments, that could involve exposing the 3D cultures to a series of alternative morphogens at different times and concentrations to simulate developmental processes.…”
Section: Discussionmentioning
confidence: 99%
“…To these ends, the ability to automatically identify and segment specific tissue types and reconstruct them in three dimensions by computerized means would greatly advance this area of developmental biology. Recently, our group and others have made advances in the application of algorithms and techniques used in automated image analysis specifically applied to recognition of tissue types in teratomas[26, 27]. The use of numerous immunohistochemical markers would aid quantitative analysis of specific tissue types (and hence germ layer derivation), although we suspect that some tissues, particularly more undifferentiated and primitive tissues may not have commercially available antibodies that would both perform adequately in formalin-fixed paraffin embedded tissues and also elucidate specific phenotypes.…”
Section: Discussionmentioning
confidence: 99%