Electrospray ionization tandem mass spectrometry (ESI-MS/MS) of protonated threonine, isotopically labelled threonine and threonine methyl ester, suggests that side chain water loss occurs via a neighbouring group participation reaction in which the free amino group displaces water from HO-protonated threonine.
Ab initio calculations show that the resultant [M H À H 2 O]product ion is a protonated aziridine, which is in contrast to previously published results, which suggested N-protonated dehydroamino-2-butyric acid as the likely structure. # 1998 John Wiley & Sons, Ltd. Received 11 May 1998; Revised 10 June 1998; Accepted 12 June 1998 Tandem mass spectrometry is rapidly becoming an indispensible tool for the structural characterization of proteins, peptides, carbohydrates and oligonucleotides. While the common fragmentation pathways of such compounds have been examined, a more detailed understanding of the complex gas phase reactivities of these compounds (for example, the influence of potentially reactive side chains on 'sequence' ion versus 'non-sequence' ion formation) is required in order to facilitate the elucidation of unknown sequences. As part of our ongoing work into probing the gas phase reactions of biomolecules, we have recently examined both the bimolecular reactivity 1 as well as the collision induced dissociation (CID) reactions of several model peptide systems. 2 In the former studies we demonstrated that the various functional groups present in simple amino acids such as glycine and cysteine can act as intermolecular nucleophiles in gas phase bimolecular alkylation reactions.