Several studies have demonstrated that monitoring of minimal residual disease (MRD) in childhood and adult acute lymphoblastic leukemia (ALL) significantly correlates with clinical outcome. MRD detection is particularly useful for evaluation of early treatment response and consequently for improved front-line therapy stratification. MRD information is also significant for children undergoing allogeneic hematopoietic stem cell transplantation and those with relapsed ALL. Currently, three highly specific and sensitive methodologies for MRD detection are available, namely multiparameter flow cytometric immunophenotyping, real-time quantitative polymerase chain reaction (RQ-PCR)-based detection of fusion gene transcripts or breakpoints, and RQ-PCR-based detection of clonal immunoglobulin and T-cell receptor gene rearrangements. In this review, characteristics, pitfalls, advantages and disadvantages of each MRD technique are critically discussed. The special emphasis is put on interlaboratory standardization, especially in view of the results obtained within the European collaborative BIOMED-1, BIOMED-2, and Europe Against Cancer projects and recent developments by European Study Group on MRD detection in ALL and EuroFlow Consortium. Standardized MRD techniques form the basis for stratification of patients into the risk groups in new treatment protocols mainly in childhood ALL. Only the results of these studies can answer the question whether MRD-based treatment intervention is associated with improved outcome. Leukemia ( The rationale for detection of MRD in ALL The concept of minimal residual disease (MRD) detection in acute lymphoblastic leukemias (ALL) is inherently associated with the progress in treatment of these malignancies. 1 More than 80% of childhood and 35% of adult ALL patients can be cured with modern chemotherapy supplemented with hematopoietic stem cell transplantation (HSCT) in high risk patients (reviewed by Hoelzer et al. 2 ). Still, a substantial number of ALL patients relapse and the prediction of relapse with conventional prognostic factors such as age, blast count at diagnosis, immunophenotype at diagnosis, presence of chromosome aberrations, response to steroid prophase and classical clinical risk group assignment is far from optimal. Also microarray-based gene expression profiling could not identify gene signatures, typically associated with high risk of relapse. Tracing residual leukemic cells during early phases of treatment provides prognostic information superior to all known classical prognostic factors. Several prospective studies in childhood ALL demonstrated that the most relevant information comes from detection of MRD in bone marrow at the early phases of treatment, particularly at the end of induction treatment (reviewed by Szczepań ski et al. 3 and Cazzaniga and Biondi 4 ). Children with undetectable MRD at the end of induction have an excellent prognosis and are good candidates for treatment de-intensification or at least should not be subjected to further treatment intensificat...