Proposal of A New Bois Noir Epidemiological Pattern Related to ‘Candidatus Phytoplasma Solani’ Strains Characterized by A Possible Moderate Virulence in Tuscany
Abstract:Bois noir (BN), associated with ‘Candidatus Phytoplasma solani’ (CaPsol), is the most widespread disease of the grapevine yellows complex worldwide. In this work, BN epidemiology was investigated in a case study vineyard where an unusual CaPsol strain, previously detected only in other host plants, was found to be prevalent in grapevine. Experimental activities included: symptom observation; sampling of symptomatic vines, Auchenorrhyncha specimens, and weeds; molecular detection and typing of CaPsol strains; s… Show more
“…These two patterns were identical to those previously reported for CaPsol tuf -type a and tuf -type b, respectively [ 3 ]. These results were consistent with previous findings of two tuf -types present in vineyards of northern [ 5 , 8 ], central [ 10 , 12 ], and southern [ 26 ] Italy. In the present work, CaPsol tuf -type a and tuf -type b were detected in 49.3% and 50.7% of the 142 symptomatic grapevine samples tested, respectively, but the two CaPsol tuf -types were differentially distributed ( Table 1 ).…”
Section: Resultssupporting
confidence: 93%
“…Bois noir (BN), a grapevine disease associated with “ Candidatus Phytoplasma solani” (CaPsol) infection, causes typical grapevine yellows (GY) symptoms and results in important crop losses in the majority of vine-growing European countries, in the Middle East, and in South America [ 1 , 2 ]. Due to the involvement of multiple insect vectors and plant hosts, the biological cycle of CaPsol is extremely complex [ 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 ], hindering the development of control strategies for effective control of BN epidemics [ 11 ]. Molecular markers of genetic diversity among grapevine-affecting phytoplasmas set a solid foundation to improve knowledge of BN epidemiology.…”
Section: Introductionmentioning
confidence: 99%
“…In Europe, sequence analysis of translation elongation factor EF-Tu gene tufB revealed two main tuf -types of CaPsol ( tuf -type a and tuf -type b) present in diseased grapevines, as well as in alternative plant hosts nearby [ 3 ], suggesting that ecological differences could be associated with molecular diversification of CaPsol populations and their differential distributions. Numerous studies on molecular typing, based on anaylses of nucleotide sequences of more variable genes (e.g., secY , stamp , vmp1 ), showed large variability among CaPsol strain populations, shedding light on differences in virulence, origin, and host range of different strains [ 10 , 12 , 13 , 14 , 15 ]. Multiple gene typing analysis was applied to investigate genetic diversity in various bacterial taxa [ 16 , 17 , 18 , 19 ].…”
Grapevine Bois noir (BN) is associated with infection by “Candidatus Phytoplasma solani” (CaPsol). In this study, an array of CaPsol strains was identified from 142 symptomatic grapevines in vineyards of northern, central, and southern Italy and North Macedonia. Molecular typing of the CaPsol strains was carried out by analysis of genes encoding 16S rRNA and translation elongation factor EF-Tu, as well as eight other previously uncharacterized genomic fragments. Strains of tuf-type a and b were found to be differentially distributed in the examined geographic regions in correlation with the prevalence of nettle and bindweed. Two sequence variants were identified in each of the four genomic segments harboring hlyC, cbiQ-glyA, trxA-truB-rsuA, and rplS-tyrS-csdB, respectively. Fifteen CaPsol lineages were identified based on distinct combinations of sequence variations within these genetic loci. Each CaPsol lineage exhibited a unique collective restriction fragment length polymorphism (RFLP) pattern and differed from each other in geographic distribution, probably in relation to the diverse ecological complexity of vineyards and their surroundings. This RFLP-based typing method could be a useful tool for investigating the ecology of CaPsol and the epidemiology of its associated diseases. Phylogenetic analyses highlighted that the sequence variants of the gene hlyC, which encodes a hemolysin III-like protein, separated into two clusters consistent with the separation of two distinct lineages on the basis of tufB gene sequences. Alignments of deduced full protein sequences of elongation factor-Tu (tufB gene) and hemolysin III-like protein (hlyC gene) revealed the presence of critical amino acid substitutions distinguishing CaPsol strains of tuf-type a and b. Findings from the present study provide new insights into the genetic diversity and ecology of CaPsol populations in vineyards.
“…These two patterns were identical to those previously reported for CaPsol tuf -type a and tuf -type b, respectively [ 3 ]. These results were consistent with previous findings of two tuf -types present in vineyards of northern [ 5 , 8 ], central [ 10 , 12 ], and southern [ 26 ] Italy. In the present work, CaPsol tuf -type a and tuf -type b were detected in 49.3% and 50.7% of the 142 symptomatic grapevine samples tested, respectively, but the two CaPsol tuf -types were differentially distributed ( Table 1 ).…”
Section: Resultssupporting
confidence: 93%
“…Bois noir (BN), a grapevine disease associated with “ Candidatus Phytoplasma solani” (CaPsol) infection, causes typical grapevine yellows (GY) symptoms and results in important crop losses in the majority of vine-growing European countries, in the Middle East, and in South America [ 1 , 2 ]. Due to the involvement of multiple insect vectors and plant hosts, the biological cycle of CaPsol is extremely complex [ 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 ], hindering the development of control strategies for effective control of BN epidemics [ 11 ]. Molecular markers of genetic diversity among grapevine-affecting phytoplasmas set a solid foundation to improve knowledge of BN epidemiology.…”
Section: Introductionmentioning
confidence: 99%
“…In Europe, sequence analysis of translation elongation factor EF-Tu gene tufB revealed two main tuf -types of CaPsol ( tuf -type a and tuf -type b) present in diseased grapevines, as well as in alternative plant hosts nearby [ 3 ], suggesting that ecological differences could be associated with molecular diversification of CaPsol populations and their differential distributions. Numerous studies on molecular typing, based on anaylses of nucleotide sequences of more variable genes (e.g., secY , stamp , vmp1 ), showed large variability among CaPsol strain populations, shedding light on differences in virulence, origin, and host range of different strains [ 10 , 12 , 13 , 14 , 15 ]. Multiple gene typing analysis was applied to investigate genetic diversity in various bacterial taxa [ 16 , 17 , 18 , 19 ].…”
Grapevine Bois noir (BN) is associated with infection by “Candidatus Phytoplasma solani” (CaPsol). In this study, an array of CaPsol strains was identified from 142 symptomatic grapevines in vineyards of northern, central, and southern Italy and North Macedonia. Molecular typing of the CaPsol strains was carried out by analysis of genes encoding 16S rRNA and translation elongation factor EF-Tu, as well as eight other previously uncharacterized genomic fragments. Strains of tuf-type a and b were found to be differentially distributed in the examined geographic regions in correlation with the prevalence of nettle and bindweed. Two sequence variants were identified in each of the four genomic segments harboring hlyC, cbiQ-glyA, trxA-truB-rsuA, and rplS-tyrS-csdB, respectively. Fifteen CaPsol lineages were identified based on distinct combinations of sequence variations within these genetic loci. Each CaPsol lineage exhibited a unique collective restriction fragment length polymorphism (RFLP) pattern and differed from each other in geographic distribution, probably in relation to the diverse ecological complexity of vineyards and their surroundings. This RFLP-based typing method could be a useful tool for investigating the ecology of CaPsol and the epidemiology of its associated diseases. Phylogenetic analyses highlighted that the sequence variants of the gene hlyC, which encodes a hemolysin III-like protein, separated into two clusters consistent with the separation of two distinct lineages on the basis of tufB gene sequences. Alignments of deduced full protein sequences of elongation factor-Tu (tufB gene) and hemolysin III-like protein (hlyC gene) revealed the presence of critical amino acid substitutions distinguishing CaPsol strains of tuf-type a and b. Findings from the present study provide new insights into the genetic diversity and ecology of CaPsol populations in vineyards.
“…P. solani’ infection in field bindweeds is far from elucidated. Plants can be either symptomatic or non-symptomatic while infected at similar rates and frequencies e.g., [ 3 , 6 , 10 , 12 , 14 , 18 , 21 , 22 , 23 , 24 ]. In our study, only at locality Kladovo symptomatic bindweed plants were infected solely with ‘ Ca.…”
Section: Discussionmentioning
confidence: 99%
“…Conversely, several more recent studies indicate that non-symptomatic plants of C. arvensis are a natural source of ‘ Ca. P. solani’ infection in agroecosystems [ 6 , 19 , 20 , 21 , 22 , 23 , 24 , 25 ]. Furthermore, the phytoplasma that is most closely related to ‘ Ca.…”
Field bindweed (Convolvulus arvensis) is one of the major natural plant hosts and reservoirs of ‘Candidatus Phytoplasma solani’ (‘Ca. P. solani’), the causal agent of plant diseases in diverse agricultural crops, including Bois noir (BN) disease of grapevine. Phylogenetically, the most closely related phytoplasma to ‘Ca. P. solani’, the ‘Ca. P. convolvuli’, induces disease in field bindweed that is known by its symptoms as bindweed yellows (BY). The occurrence, coinfection and symptoms association of the two phytoplasmas in shared host plants were the subject of this study. Specific primers for the amplification of the elongation factor Tu gene (tuf) were developed for the identification of ‘Ca. P. convolvuli’ (by conventional nested PCR), as well as primers for simultaneous detection of ‘Ca. P. solani’ and ‘Ca. P. convolvuli’ by duplex SYBR Green real-time PCR. Among symptomatic bindweed plants, 25 and 41% were infected with a single phytoplasma species, ‘Ca. P. solani’ and ‘Ca. P. convolvuli’, respectively, while 34% were infected with both phytoplasmas. None of the non-symptomatic control plants carried phytoplasma, while non-symptomatic plants from our previous epidemiological studies in BN-affected vineyards were confirmed to be infected solely with ‘Ca. P. solani’. Stamp gene typing revealed Rqg50 and Rqg31 ‘Ca. P. solani’ genotypes in plants coinfected with ‘Ca. P. convolvuli’, while three diverse genotypes (Rqg50, GGY and Rpm35) were identified in a single locality with symptomatic bindweeds infected solely with ‘Ca. P. solani’. Variations in symptoms and their association with each of the phytoplasmas are described and documented. The symptom of bushy appearance could be single out as specific for ‘Ca. P. convolvuli’ infection, while occurrence of ‘Ca. P. solani’ could not be unequivocally associated with specific alterations in infected bindweeds. The results are discussed in the context of the epidemiological and ecological complexity of ‘Ca. P. solani’-induced diseases and the relationship between the two phytoplasma relatives in shared host plant.
Bois noir (BN), a disease of the grapevine yellows complex associated with 'Candidatus Phytoplasma solani' (CaPsol), represents a great threat in all wine growing areas worldwide. Several studies revealed that BN epidemiology is extremely complex, including multiple insect vectors and plant hosts. In the present work, a survey on putative CaPsol insect vectors along with molecular typing of CaPsol strains was conducted to in-depth investigate the BN epidemiology in a BN-affected vineyard in Greve in Chianti (the Chianti Classico area, the Tuscany region), where the role of Reptalus artemisiae in transmitting CaPsol to grapevine was previously hypothesized. No Hyalesthes obsoletus specimens were captured, while Reptalus. artemisiae and Neoaliturus. fenestratus were found largely prevalent. Real-time PCR assay detected CaPsol in 41% and 37.5% of N. fenestratus and R. artemisiae specimens, respectively. Molecular typing evidenced that R. artemisiae and N. fenestratus are infected by CaPsol strains carrying mainly the stamp sequence variant St10 and St5, respectively. Other insects (Philaenus spumarius, Dictyophara europaea, Psammotettix spp.), reported as CaPsol vectors to grapevine in North Italy and poorly present in Greve in Chiantithe examined vineyard, was found infected by CaPsol strains carrying mainly the stamp sequence variant St5. In a recent study, these strains were found as the most abundant in grapevines (St5 and St10) and weeds (St10) in the examined vineyardChianti Classico area. Such results were reinforced by nucleotide sequence analyses of secY gene. Based on this and previous evidence, reporting the CaPsol vectoring activity of both R. artemisiae and N. fenestratus, it is reasonable to suggest that two mainthe role of such insects cycles can be involved in BN epidemiology in the Chianti Classico area. : (i) grapevine -R. artemisiae -weeds for CaPsol strains carrying the stamp variant St10; (ii) grapevine -N. fenestratus (plus other insects with a minor role) for CaPsol strains carrying the stamp variant St5. Thus, Ffurther studies are necessary to prove the vectoring activity of CaPsol by R. artemisiae and N. fenestratus to grapevine and understand their ecological and epidemiological role in the vineyard agroecosystem, including CaPsol source plants (insect host plants)., investigate the role of weeds in 3 CaPsol transmission routes to grapevine, clarify if grapevine can act as reservoir plant for CaPsol acquisition for these putative vectors.
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