Abstract. Isozymes of several different classes of enzymes in partially purified protein extracts of five strains of Schizophyllum commune, isogenic except for genes controlling sexual morphogenesis, were separated on polyacrylamide gel by disc electrophoresis. After staining, isozyme patterns wevere compared on the bases of the presence or absence, electrophoretic mobility (Rf values), and relative activities of specific isozymes. Differences in isozyme patterns in 14 enzymes, i.e., NADH-dehydrogenase, NADPH-dehydrogenase, a number of NADand NADP-dependent dehydrogenases, acid phosphatases, leucine aminopeptidase, and esterases, were correlated with the operation or inactivity of the A-and B-sequences of sexual morphogenesis. In only a single instance, i.e., phenolases, ISo marked differences could be correlated with sexual morphogenesis.In Schizophyllum commune and related higher fungi, mating of compatible, haploid, homokaryotic strains converts both mates into a fertile, specialized heterokaryon, the dikaryon, the genetic and physiological equivalent of the diploid. The morphological distinction between the homokaryon and the dikaryon is simple: the former consists of uninucleate cells, and its septa are simple; the latter is made up of binucleate cells (one nucleus from each original mate), and its septa have external appendages known as clamp connections. The establishment of the dikaryon has been termed sexual morphogenesis," 2 and it consists of a sequence of several steps that are precisely regulated by the A and B incompatibility factors. When both A and B factors of the two mates are different, the entire sequence of events ensues with the establishment of the dikaryon. When only the A factors are different, only certain of the stages occur. These are collectively termed the A-sequence, and the result is the common-B heterokaryon. Similarly, when only the B factors are different, only the initial step of the process, nuclear migration, occurs; this is the main event of the B-sequence, and the result is the common-A heterokaryon. -Morphologically, the common factor heterokaryons are quite distinct from the homokaryon and the dikaryon, as well as from each other.3It is a significanMit feature of this system that the A-and B-sequences can be "turned on" by meais other thaIs the interaction of pairs of different A and different B factors.4 5 A mutation in either of the factors has the same effect in the homokaryon as a pair of compatible factors in the heterokaryoil: a mutant-B strain is thus a close mimic of the common-A heterokaryon; a mutant-A 882