2019
DOI: 10.1371/journal.pone.0215621
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Prevalence of p53 dysregulations in feline oral squamous cell carcinoma and non-neoplastic oral mucosa

Abstract: Squamous cell carcinoma is the most common malignant oral tumor in cats. The late presentation is one of the factors contributing to the detrimental prognosis of this disease. The immunohistochemical expression of the p53 tumor suppressor protein has been reported in 24% to 65% of feline oral squamous cell carcinomas, but no study has systematically evaluated in this tumor the presence of p53 encoding gene ( TP53 ) mutations. The aim of this retrospective study was to determine whether p… Show more

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Cited by 21 publications
(29 citation statements)
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References 39 publications
(56 reference statements)
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“…As in a previous study, 6 *Is used in the standard mutation nomenclature to indicate a translation stop codon; it is part of the nomenclature of the mutation so it does not need to be explained in this specific case.…”
Section: Discussionmentioning
confidence: 99%
See 3 more Smart Citations
“…As in a previous study, 6 *Is used in the standard mutation nomenclature to indicate a translation stop codon; it is part of the nomenclature of the mutation so it does not need to be explained in this specific case.…”
Section: Discussionmentioning
confidence: 99%
“…TP53 mutations analysis of exons 5‐8 was performed as previously described 6 . Cases were classified as mutated when presenting one or more alterations in the nucleotide sequence of the amplified exons of feline TP53 , resulting in amino acid changes with negative impact on the protein function according to PolyPhen‐2 42 and showing a variant allele frequency >10%.…”
Section: Methodsmentioning
confidence: 99%
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“…Quantitative DNA methylation analysis was performed by next-generation sequencing for the following genes: uc.160, uc.283, uc.283 promoter, uc.416, uc.339, uc.270, uc.299, and uc.328. Locus-specific amplicon libraries were generated with tagged primers in two steps: a first PCR amplification for target enrichment, and a second shorter amplification session (eight cycles) to allow the barcoding of the template-specific amplicons obtained from the first amplification step using the Nextera™ Index Kit (Illumina, San Diego, CA, USA) [ 22 , 23 , 24 , 25 , 26 ]. Sequencing was conducted on MiSeq sequencer (Illumina, San Diego, CA, USA), according to the manufacturer’s protocol.…”
Section: Methodsmentioning
confidence: 99%