Many species of gram-positive bacteria produce branched peptidoglycan precursors resulting from the transfer of various L-amino acids or glycine from amino acyl-tRNA to the -amino group of L-lysine. The UDP-MurNAc-pentapeptide:L-alanine ligase and alanyl-tRNA synthetase genes from Enterococcus faecalis were identified, cloned, and overexpressed in Escherichia coli. The purified enzymes were necessary and sufficient for tRNA-dependent addition of L-alanine to UDP-MurNAc-pentapeptide in vitro. The ligase belonged to the Fem family of proteins, which were initially identified genetically as factors essential for methicillin resistance in Staphylococcus aureus.In gram-positive bacteria, the ε-amino group of L-lysine in the pentapeptide stem of peptidoglycan precursors is often replaced by amino acid chains of various lengths and compositions (19) (Fig. 1). These amino acids form cross bridges between L-Lys 3 and D-Ala 4 following cross-linking of the peptide stems from nascent chains of peptidoglycan by the D,Dtranspeptidases. The ligases for the addition of glycine and L-amino acids to the ε-amino group of L-lysine use aminoacyltRNAs as substrates, whereas D-amino acids are added in a tRNA-independent reaction (15,20).In Staphylococcus aureus, the femA, femB, and fmhB genes were shown to be essential for incorporation of glycine into the side chain of peptidoglycan precursors (18, 21). The femAB locus was initially identified as a factor essential for methicillin resistance (fem) based on random insertional inactivation of chromosomal genes and a screen for reduced expression of resistance mediated by the penicillin binding protein 2A (PBP2A) (2, 5). Inactivation of femA or femB was subsequently reported to prevent incorporation of glycine residues at positions 2 to 5 or positions 4 to 5 of the penta-glycine cross bridge since muropeptides cross-linked by one or three glycine residues were detected in the corresponding mutants (4, 21). Inactivation of fmhB, formerly femX, is lethal, but the construction of a mutant conditionally expressing fmhB under the control of a xylose-inducible promoter showed that the gene was essential for synthesis of branched peptidoglycan precursors (18). These results indicated that the fem gene products were required for incorporation of glycine at positions 1 (FmhB), 2 and 3 (FemA), and 4 and 5 (FemB) of the cross bridge, although the catalytic activity of the proteins was not directly assessed (18). Similarly, inactivation of two fmhB homologues in Streptococcus pneumoniae, designated murM (fibA) and murN (fibB), reduced addition of L-Ala or L-Ser to the ε-amino group of L-Lys and subsequent addition of a second L-Ala residue, respectively (6, 7, 23). Overall, disruption of the murMN operon reduced the proportion of branched peptide stems in the peptidoglycan from 89 to 33% (6). In contrast to what occurs in S. aureus (18), direct cross-linking of L-Lys to D-Ala occurs in S. pneumoniae, and the murMN operon was accordingly reported to be unessential (6). However, production of branch...