Abstract. Phylogeographic, nested clade, and mismatch analyses of mitochondrial DNA (mtDNA) variation were used to infer the temporal dynamics of distributional and demographic history of brown trout (Salmo trutta). Both new and previously published data were analyzed for 1794 trout from 174 populations. This combined analysis improved our knowledge of the complex evolutionary history of brown trout throughout its native Eurasian and North African range of distribution in many ways. It confirmed the existence of five major evolutionary lineages that evolved in geographic isolation during the Pleistocene and have remained largely allopatric since then. These should be recognized as the basic evolutionarily significant units within brown trout. Finer phylogeographic structuring was also resolved within major lineages. Contrasting temporal juxtaposition of different evolutionary factors and timing of major demographic expansions were observed among lineages. These unique evolutionary histories have been shaped both by the differential latitudinal impact of glaciations on habitat loss and potential for dispersal, as well as climatic impacts and landscape heterogeneity that translated in a longitudinal pattern of genetic diversity and population structuring at more southern latitudes. This study also provided evidence for the role of biological factors in addition to that of physical isolation in limiting introgressive hybridization among major trout lineages.Key words. Europe, fish, mismatch, mitochondrial DNA, nested clade, phylogeography, Salmo.Received March 7, 2000. Accepted September 18, 2000 Elucidating the evolutionary history of extant species is an important objective of any research program that seeks to understand population divergence and, ultimately, speciation. This history is also directly relevant to conservation biology because historical contingencies have been largely responsible for creating the most important genetic subdivisions in many, if not most extant taxa (e.g., Zink 1996; Avise et al. 1998;Hewitt 2000). The phylogeographic approach has been used to test the congruence between distributional histories against paleo-environmental settings and determining the chronology of evolutionary diversification (Avise 1998;Moritz and Bermingham 1998). Comparative phylogeography has also emerged as a powerful method to address broader ecological and evolutionary issues.In northern temperate freshwater fishes, comparative phylogeography revealed predictive trends in phylogeographic structure, genetic diversity, and speciation rates among species inhabiting formerly glaciated and unglaciated regions of North America (Bernatchez and Wilson 1998). Further generalizations of the effect of Pleistocene glaciations on freshwater fish fauna could be gained by comparing phylogeographic data from other regions. Contrasts between Eurasian and North American freshwater fish phylogeographic structure (e.g., Bernatchez et al. 1989) would be particularly informative, given the much less extensive glacial advances in ...