Population structure and variability of Pacific herring (Clupea pallasii) in the White Sea, Barents and Kara Seas revealed by microsatellite DNA analyses

Семенова, А. В.; Stroganov, A. N.; Afanasiev, K. I.; Рубцова, Г. А.

doi:10.1007/s00300-015-1653-8

Cited by 11 publications

(2 citation statements)

References 64 publications

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“…Similar high genetic diversity was also reported in other economically important marine fish, such as Lateolabrax maculatus (Wei Wang et al, 2021), Setipinna tenuifilis , and Lutjanus argentimaculatus (Vineesh et al, 2022). The average number of alleles per locus of K. punctatus (29.20) was relatively higher than that of other Clupeiformes, such as Coilia nasus (10.65) (Yang et al, 2014), Clupea pallasii (10.50) (Semenova et al, 2015), and Engraulis ringens (11.53) (Ferrada-Fuentes et al, 2018). The high genetic diversity indices typically indicate either large population sizes and/or high mutation rates (Kimura, 1979).…”

Section: Population Genetic Diversitysupporting

confidence: 70%

Population structure and genetic diversity in wild dotted gizzard shad (Konosirus punctatus) revealed by microsatellite markers

Liu

Zhang

et al. 2022

Front. Mar. Sci.

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Uncovering the fine-scale genetic structure has been long recognized as a key component in policymaking for the management of marine fisheries. Many species of Clupeiformes have suffered declines owing to overexploitation and habitat destruction. In this study, twenty polymorphic microsatellite markers were used to evaluate the genetic diversity and population structure of Konosirus punctatus, a pelagic fish of economic and ecological importance in the Northwestern Pacific Ocean. Although most of the variance occurred within individuals, significant differentiation (FST = 0.00384~0.19346) was shown in wild K. punctatus populations. Population structure analyses revealed five genetically divergent clades in K. punctatus in the Northwestern Pacific. Significant isolation by distance and one potentially outlier locus were revealed in K. punctatus, suggesting that interactions between historical climate shifts and environmental factors may contribute to the present-day genetic architecture. In summary, these results provided new perspectives on the population genetic structure of K. punctatus, facilitating the development of effective management strategies for this species.

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Section: Population Genetic Diversitysupporting

confidence: 70%

Population structure and genetic diversity in wild dotted gizzard shad (Konosirus punctatus) revealed by microsatellite markers

Liu

Zhang

et al. 2022

Front. Mar. Sci.

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“…Navaga may have population structure that corresponds to estuaries of rivers that ow into different bays. Genetic structure has also been observed for Paci c herring (Clupea pallasii), another nearshore species within the White, Barents, and Kara seas (Semenova et al 2015).…”

Section: Introductionmentioning

confidence: 82%

Demography of a nearshore gadid navaga, Eleginus nawaga, from the Barents Sea coast during the last glacial period

et al. 2023

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Recent glaciations in northwestern Russia completely covered the Barents Sea during four glacial advances. At the peaks of those glacial advances, there were no nearshore macrofauna. Consequently, colonization by species that now inhabit present-day nearshore waters must have occurred since the habitat became available and hospitable, less than 15 ka. We analyzed microsatellite data from Eleginus nawaga (Gadiformes: Gadidae) collected from Khaipudyrskaya Bay in the southeastern Barents Sea with coalescent-based models to estimate the times and effective population sizes that existed before and after major historical demographic changes. Colonization of E. nawaga, which could only follow establishment of a lower trophic-level food web, provides an indicator of the for that timing. The results of the analyses were consistent with two major demographic events. After an initial founding event from a small number of individuals before ~ 140 ka, the population grew to an effective size of about 2700 individuals. Subsequently, probably as the ice receded after the Last Glacial Maximum, it plateaued at ~ 26,000 about 3000 years ago. Colonization likely came from eastern populations following the Saalian Period, after which there was little nearshore ice to the East of the Kara Sea.

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Otolith variation in Pacific herring (Clupea pallasii) reflects mitogenomic variation rather than the subspecies classification

et al. 2016

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Population structure and variability of Pacific herring (Clupea pallasii) in the White Sea, Barents and Kara Seas revealed by microsatellite DNA analyses

Cited by 11 publications

References 64 publications

Population structure and genetic diversity in wild dotted gizzard shad (Konosirus punctatus) revealed by microsatellite markers

Population structure and genetic diversity in wild dotted gizzard shad (Konosirus punctatus) revealed by microsatellite markers

Demography of a nearshore gadid navaga, Eleginus nawaga, from the Barents Sea coast during the last glacial period

Otolith variation in Pacific herring (Clupea pallasii) reflects mitogenomic variation rather than the subspecies classification

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