Comparison of bovine a1-antichymotrypsin (ACT) protease inhibitor with that in human was achieved by cloning a nearly full-length bovine ACT cDNA of 1.5 kb, obtained by screening a bovine liver cDNA library with the human liver ACT cDNA. The deduced primary sequence indicated that the 1456-bp bovine ACT cDNA encodes a protein of 416 amino acids that contains the predicted full-length ACT with a 26-residue NH2-terminal signal sequence. Overall, the primary sequence of bovine ACT possesses a high degree of homology (55%) with hman ACT; both bovine and human ACTs share common sequences in the reactive-site domains. Importantly, the reactive site ofbovine ACT poses serine as the predicted P1 position (residue at the NH2-terminal side of the cleaved peptide bond) of the reactive site, whereas human ACT contains leucine in the Pi position. Interestingly, further evidence for heterogeneity in Pi residues was provided by a second partial 0.9-kb bovine liver ACT cDNA done (pHHK11) that contains isoleucine as Pi residue and shares only partial homology (68%) with the deduced primary sequence of the full-length bovine liver ACT cDNA clone (pHHK12). These findings suggest that isoforms of ACT in bovine liver vary in reactive-site P1 residues; the Pi position of the reactive site is often involved in proteae inhibitor speciflcity. Consistent with the hypothesis of ACT isoforms was the demonstration of multiple copies of the bovine ACT gene by genomic blots.a1-Antichymotrypsin (ACT) is a member of the sMrine protease inhibitor family known as serpins. ACT, al-antitrypsin (a1-AT), and antithrombin III are plasma protease inhibitors that represent =10% of total human plasma proteins; these protease inhibitors are related to a variety of diseases (1, 2).The target substrates of ACT are believed to include chymotrypsin-like proteases and neutrophil cathepsin G. Plasma levels of ACT increase by four times in response to inflammatory states (1, 2). Thus, ACT has been implicated in acute-phase responses to burn injuries (3), surgery (4), and certain cancers (5). ACT also binds DNA and inhibits DNA polymerase (6). ACT has been implicated in nervous system functions, as indicated by its colocalization with -3-amyloid peptide in amyloid plaques of Alzheimer disease brains (7). Recent studies have demonstrated a functional role for ACT inhibition of a neuropeptide precursor processing enzyme, "prohormone thiol protease," required in peptide hormone and neurotransmitter biosynthesis (8). These studies implicate the diverse functions of ACT.The specificity of ACT and other serpins in inhibiting target proteases is, in part, determined by the P1 residue at the reactive site that resembles the substrate-cleavage site oftheprotease (1,2), where P1 and P1' represent residues at the NH2-and COOH-terninal sides of the cleaved peptide bond, respectively. Mutagenesis studies (9) have shown that ACT inhibits chymotrypsin when the P1 residue is leucine or methionine; however, ACT with arginine in the P1 position possesses an altered specifi...