A protein (PhaX) that interacted with poly(3-hydroxybutyrate) (PHB) depolymerase PhaZa1 and with PHB granule-associated phasin protein PhaP2 was identified by two-hybrid analysis. Deletion of phaX resulted in an increase in the level of polyphosphate (polyP) granule formation and in impairment of PHB utilization in nutrient broth-gluconate cultures. A procedure for enrichment of polyP granules from cell extracts was developed. Twenty-seven proteins that were absent in other cell fractions were identified in the polyP granule fraction by proteome analysis. One protein (A2437) harbored motifs characteristic of type 1 polyphosphate kinases (PPK1s), and two proteins (A1212, A1271) had PPK2 motifs. In vivo colocalization with polyP granules was confirmed by expression of C-and N-terminal fusions of enhanced yellow fluorescent protein (eYFP) with the three polyphosphate kinases (PPKs). Screening of the genome DNA sequence for additional proteins with PPK motifs revealed one protein with PPK1 motifs and three proteins with PPK2 motifs. Construction and subsequent expression of C-and N-terminal fusions of the four new PPK candidates with eYFP showed that only A1979 (PPK2 motif) colocalized with polyP granules. The other three proteins formed fluorescent foci near the cell pole (apart from polyP) (A0997, B1019) or were soluble (A0226). Expression of the Ralstonia eutropha ppk (ppk Reu ) genes in an Escherichia coli ⌬ppk background and construction of a set of single and multiple chromosomal deletions revealed that both A2437 (PPK1a) and A1212 (PPK2c) contributed to polyP granule formation. Mutants with deletion of both genes were unable to produce polyP granules. The formation and utilization of PHB and polyP granules were investigated in different chromosomal backgrounds. R alstonia eutropha H16 is a facultative chemolithoautotrophic bacterium and has become famous because of its ability to grow autotrophically with hydrogen as the electron donor (the organism is referred to as Knallgasbakterium in German) and to accumulate large amounts of poly(3-hydroxybutyrate) (PHB). The PHB produced by R. eutropha or related species is, meanwhile, a commercially available biopolymer (1, 2). The formation of polyhydroxyalkanoates (PHAs) was studied in the past by many groups (for reviews, see references 3 to 9). Meanwhile, it is generally accepted that PHB granules are supramolecular complexes, and the designation as carbonosomes has been suggested for PHA granules (10). Carbonosomes are composed of a polymer core and have a surface layer of up to 16 proteins with different functions.Inspection of the R. eutropha genome sequence (11) reveals the presence of the key enzymes for biosynthesis of biopolymers other than PHB, such as cyanophycin synthase (12) and polyphosphate kinase (PPK). While the synthesis of cyanophycin has not yet been demonstrated in R. eutropha, the formation of polyphosphate (polyP) is thought to be ubiquitous in all organisms (13-15). Indeed, the formation of polyP granules in R. eutropha is evident from early i...