12Littorina brevicula is one of the most common gastropods in the intertidal-supralittoral zone around Japan. 13 The northernmost population of this species is around Hokkaido, and the determinant of this northern limit is 14 likely seawater and air temperature. To reconstruct an evolutionary history of this species, we investigated 15 genetic differentiation among 12 populations (three from Hokkaido, six from Honshu and three from Kyushu) 16 using a mitochondrial DNA marker (partial sequence of the NADH dehydrogenase 6 gene). The haplotype 17 network showed shallow genetic divergence within the species, suggesting a bottleneck followed by 18 population expansion. One major haplotype that occurred in 70.5% of all individuals examined was the most 19 frequent in every population sampled. A second major haplotype was abundant around Kyushu but not found 20 in Hokkaido. This skewed haplotype distribution resulted in significant genetic differentiation along the 21 north-south axis of Japan. The importance of the southern clade, which included the second major haplotype, 22 was supported by population analyses of datasets that excluded either the southern clade or the northern clades. 23 The north-south differentiation remained when datasets were analyzed that excluded the northern clades, but 24 disappeared when datasets were analyzed that excluded the southern clade. The combined evidence of shallow 25 divergence and the north-south population structure suggests that the L. brevicula population around Japan 26 once declined and then expanded and colonized northward. Although the time of population reduction and 27 re-colonization could not be precisely estimated, the observation that this species is absent further north in 28 Japan suggests that it would have been unable to survive in northern Japan during the last glacial maximum 29 (LGM) and therefore re-colonization likely occurred after the LGM, probably from south to north. Many species in the northern hemisphere probably underwent changes to their distribution as a result of strong 34 influence from climate oscillation during glacial periods, particularly in the last glacial maximum (LGM) that 35 lasted until around 20,000 years ago and in the subsequent rapid warming. Such distributional changes can be 36 detected by phylogeographic investigations using suitable molecular markers (Hewitt, 2000). The coastal 37 ecosystem was considerably influenced by the LGM and thus various species exhibit genetic evidence of rapid 38 expansion and/or colonization, probably occurring in the post-glacial period. Examples include the near-shore 39 fish Syngnathus leptorhynchus (Wilson, 2006) and Xiphister mucosus (Marko et al., 2010), seaweed Pelvetia 40 canaliculata (Neiva et al., 2014), gastropods Nassarius nitidus (Albaina et al., 2012), Littorina sitkana and L. 41 scutulata (Marko et al., 2010), and starfish Pisaster ochraceus and Evasterias troschelii (Marko et al., 2010). 42 Around Japan, glacial effects on intertidal molluscs have bee...