2022
DOI: 10.1016/j.ympev.2021.107377
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Phylogenomic analysis, reclassification, and evolution of South American nemesioid burrowing mygalomorph spiders

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Cited by 12 publications
(9 citation statements)
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“…For analyses not requiring informative branch lengths, we constructed a more inclusive supertree using several recent mygalomorph‐focused genomic phylogenies. We downloaded the maximum‐likelihood phylogenies of Opatova et al ( 2020 ) – Mygalomorphae‐focused (AHE data); Hedin et al ( 2018 ) – Atracidae‐, Actinopodidae‐, and Hexathelidae‐focused (ultra‐conserved elements [UCE]); Hedin et al ( 2019 ) – Atypoidea‐focused (UCE); and Montes de Oca et al ( 2022 ) – Nemesoidina‐focused (AHE). For the latter, the raw tree file was not available, so we generated a new maximum‐likelihood phylogeny using IQtree (Nguyen et al, 2015 ) using the alignment and partition files from the study (Appendix S1 ).…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…For analyses not requiring informative branch lengths, we constructed a more inclusive supertree using several recent mygalomorph‐focused genomic phylogenies. We downloaded the maximum‐likelihood phylogenies of Opatova et al ( 2020 ) – Mygalomorphae‐focused (AHE data); Hedin et al ( 2018 ) – Atracidae‐, Actinopodidae‐, and Hexathelidae‐focused (ultra‐conserved elements [UCE]); Hedin et al ( 2019 ) – Atypoidea‐focused (UCE); and Montes de Oca et al ( 2022 ) – Nemesoidina‐focused (AHE). For the latter, the raw tree file was not available, so we generated a new maximum‐likelihood phylogeny using IQtree (Nguyen et al, 2015 ) using the alignment and partition files from the study (Appendix S1 ).…”
Section: Methodsmentioning
confidence: 99%
“…This exhaustive morphological review, and the accompanying cladistics‐based phylogeny, served as the foundation of mygalomorph systematics for two decades and remains the most complete synopsis of mygalomorph morphology available. However, the implementation of molecular methods has revealed phylogenetic relationships in stark discordance with those deduced from morphology: over half the traditional families were revealed to be paraphyletic and accepted interfamilial relationships have changed dramatically (Bond et al, 2012 ; Hedin et al, 2018 , 2019 ; Hedin & Bond, 2006 ; Montes de Oca et al, 2022 ; Opatova et al, 2020 ). With the recent taxon‐rich, genomic phylogeny of Opatova et al ( 2020 ), accepted mygalomorph relationships have largely stabilized.…”
Section: Introductionmentioning
confidence: 99%
“…Psalistopoides was newly transferred to the family Pycnothelidae Chamberlin, 1917 by Montes de Oca et al . (2022) and is now part of the subfamily Pselligminae Mello-Leitão, 1923 alongside the genera Pselligmus Simon, 1892a, Stenoterommata Holmberg, 1881, and Rachias Simon, 1892b.…”
Section: Introductionmentioning
confidence: 99%
“…This exhaustive morphological review, and the accompanying cladistics-based phylogeny, served as the foundation of mygalomorph systematics for two decades and remains the most complete synopsis of mygalomorph morphology available. However, the implementation of molecular methods has revealed phylogenetic relationships in stark discordance with those deduced from morphology: over half the traditional families were revealed to be paraphyletic and accepted interfamilial relationships have changed dramatically (Bond et al, 2012;Hedin et al, 2018Hedin et al, , 2019Hedin & Bond, 2006;Montes de Oca et al, 2022;Opatova et al, 2020). With the recent taxon-rich, genomic phylogeny of Opatova et al (2020), accepted mygalomorph relationships have largely stabilized.…”
mentioning
confidence: 99%
“…Figure 4. Maximum likelihood tree generated using IQtree(Nguyen et al, 2015) with the alignment and partition files of Montes deOca et al (2022). This was then used as one of the input trees for supertree construction.…”
mentioning
confidence: 99%