2016
DOI: 10.1007/s00026-016-0317-x
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Phylogenetic Invariants for $${\mathbb{Z}_3}$$ Z 3 Scheme-Theoretically

Abstract: Abstract.We study phylogenetic invariants of general group-based models of evolution with group of symmetries Z 3 . We prove that complex projective schemes corresponding to the ideal I of phylogenetic invariants of such a model and to its subideal I generated by elements of degree at most 3 are the same. This is motivated by a conjecture of Sturmfels and Sullivant [14, Conj. 29], which would imply that I = I .

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Cited by 6 publications
(3 citation statements)
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“…For real data applications of phylogenetic invariants we refer for example to [RH12]. We would also like to mention that a related result was recently obtained by Donten-Bury in [DB16] on scheme-theoretic level.…”
Section: Introductionmentioning
confidence: 96%
“…For real data applications of phylogenetic invariants we refer for example to [RH12]. We would also like to mention that a related result was recently obtained by Donten-Bury in [DB16] on scheme-theoretic level.…”
Section: Introductionmentioning
confidence: 96%
“…Phylogenetics is a science that models evolution and describes mutations in this process [13]. This topic reveals many connections to several branches of mathematics such as algebraic geometry [12], [2], [22], and combinatorics [21], [7].…”
Section: Introductionmentioning
confidence: 99%
“…The part of computational biology that models evolution and describes mutations in this process is called phylogenetics [40]. This is a fertile subject witnessing many connections to several parts of mathematics such as algebraic geometry [8,23], combinatorics [4,15,34], and representation theory [9,31]. The methods used in this context of research are powerful and do not only apply to biology, but are employed in several other fields [2] such as modeling changes of words in languages [21], literary studies [3] or linguistics itself [37] with ideas going back to Darwin [14].…”
Section: Introductionmentioning
confidence: 99%