Yeast mitochondrial DNA codes for eight major polypeptides. Translation of he mitochondrially encoded polypeptides in strains with mutated mitochondrial release factor, mRF1, was found to result in the synthesis of a novel protein, V2. Different mrf1 alleles were associated with different efficiency of V2p synthesis. Translation of V2p was enhanced by paromomycin. Comparative analysis of peptides resulting from protease digestion indicated that V2p is a derivative of Var1p. According to our hypothesis, V2p represents a readthrough product of the natural stop codon in VAR1 mRNA.An effective way of investigating the expression of genes in mtDNA is based on studying the control exerted by the nucleus over mitochondrial functions. This is due to replication, transcription and translation apparatus in mitochondria being composed mostly of polypeptides encoded by nuclear DNA. The yeast Saccharomyces cerevisiae, being a facultative anaerobe, offers distinct advantages for mitochondrial genetic studies. Several hundred respiratory deficient point mutations or small deletions, called mit -, have been genetically mapped and assigned to genes in mtDNA. Respiration of mitstrain Vol. 52 No. 1/2005 [129][130][131][132][133][134][135][136][137] QUARTERLY .