Inactivation of the sigC gene (sll0184), encoding the group 2 sigma factor SigC, leads to a heatsensitive phenotype of Synechocystis sp. PCC 6803. Cells of the DsigC strain grew poorly at 43 6C at pH 7.5 under ambient CO 2 conditions. Addition of inorganic carbon in the form of 3 % CO 2 or use of an alkaline growth medium (pH 8.3) restored the growth of the DsigC strain at 43 6C. These treatments compensate for the low concentration of inorganic carbon at high temperature. However, addition of organic carbon as glucose, pyruvate, succinate or 2-oxoglutarate did not restore growth of the DsigC strain at 43 6C. In the control strain, the amount of the SigC factor diminished after prolonged incubation at 43 6C if the pH of the growth medium was 7.5 or 6.7. Under alkaline conditions, the amount of the SigC factor remained constant at 43 6C and cells of the control strain grew better than at pH 7.5 or pH 6.7. The pH dependence of high-temperature growth was associated with changes in photosynthetic activity, indicating that the SigC factor is involved in adjustment of photosynthesis according to the amount of available inorganic carbon. Our results indicate that acclimation to low inorganic carbon is a part of acclimation to prolonged high temperature and that the SigC factor has a central role in this acclimation.
INTRODUCTIONCyanobacteria are a group of evolutionarily ancient eubacteria that perform oxygenic photosynthesis, like higher plants and algae. According to the endosymbiosis theory, cyanobacteria are progenitors of plant chloroplasts. The ability of cyanobacteria to survive under a range of different environmental stress conditions makes them valuable model organisms for studies of molecular mechanisms of acclimation. In particular, the unicellular cyanobacterium Synechocystis sp. PCC 6803 (hereafter referred to as Synechocystis) has been extensively used in gene expression studies under a variety of different stress conditions (Huang et al., 2002;Suzuki et al., 2005; Osanai et al., 2006;Singh et al., 2006;Slabas et al., 2006;Tuominen et al., 2008). These and other studies have demonstrated that acclimation to changing environmental conditions requires changes in gene expression over a wide range of different functions. The sigma (s) subunit of RNA polymerase holoenzyme is a key determinant of promoter recognition and transcription initiation in eubacteria, and replacement of a s factor in RNA polymerase holoenzyme with another one switches the transcription pattern (Wösten, 1998).The genome of Synechocystis contains nine genes encoding s factors (Kaneko et al., 1996). The primary s factor SigA is essential for cell viability (Imamura et al., 2003). The sigB, sigC, sigD and sigE genes encode group 2 s factors that closely resemble the SigA factor but are not essential for cell viability . Recent studies show that group 2 s factors are important for acclimation of cyanobacteria to suboptimal conditions (Muro-Pastor et al., 2001a;Imamura et al., 2003;Osanai et al., 2005 Osanai et al., , 2006Singh et al., 2...