Pertussis toxin (PT), a virulence factor secreted by Bordetella pertussis, contributes to respiratory tract infection and disease caused by this pathogen. By comparing a wild-type (WT) B. pertussis strain to a mutant strain with an in-frame deletion of the ptx genes encoding PT (⌬PT), we recently found that the lack of PT confers a significant defect in respiratory tract colonization in mice after intranasal inoculation. In this study, we analyzed serum antibody responses in mice infected with the WT or ⌬PT strain and found that infection with the ⌬PT strain elicited greater responses to several B. pertussis antigens than did infection with the WT, despite the lower colonization level achieved by the ⌬PT strain. The same enhanced antibody response was observed after infection with a strain expressing an enzymatically inactive PT; but this response was not observed after infection with B. pertussis mutant strains lacking filamentous hemagglutinin or adenylate cyclase toxin, nor when purified PT was administered with the ⌬PT inoculum, indicating a specific role for PT activity in this immunosuppressive effect. In particular, there were consistent strong serum antibody responses to one or more low-molecular-weight antigens after infection with the ⌬PT strain. These antigens were Bvg independent, membrane localized, and also expressed by the closely related pathogens Bordetella parapertussis and Bordetella bronchiseptica. Two-dimensional gel electrophoresis and mass spectrometry were used to identify one of the immunodominant low-molecular-weight antigens as a protein with significant sequence homology to peptidoglycan-associated lipoprotein in several other gram-negative bacterial species. However, a serum antibody response to this protein alone did not protect mice against respiratory tract infection by B. pertussis.Pertussis toxin (PT) is an important virulence factor produced exclusively by Bordetella pertussis, a gram-negative bacterial pathogen that colonizes the human respiratory tract and causes a disease known as whooping cough or pertussis. PT is a member of the AB 5 structural class of bacterial toxins (41, 43), consisting of an enzymatically active A subunit (S1) that ADP-ribosylates the alpha subunit of the Gi family of heterotrimeric G proteins in mammalian cells (17, 30) and a pentameric B oligomer that binds unidentified glycoconjugate receptors on cells (5, 48). PT activity has a wide range of effects on signaling pathways and normal function in mammalian cells (35,49). The administration of purified PT to experimental animals can reproduce almost all of the systemic symptoms associated with human pertussis disease, such as histamine sensitivity, lymphocytosis, and insulinemia (29, 31, 32), but its role in respiratory tract colonization and disease is uncertain. Several studies of mice intranasally infected with bacteria have shown that PT plays a role in the overall respiratory tract infection by B. pertussis (2,10,45,46). Recently, it was found that PT is a significant colonization factor for resp...