2021
DOI: 10.1038/s41598-021-80967-5
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Personalized treatment options for chronic diseases using precision cohort analytics

Abstract: To support point-of-care decision making by presenting outcomes of past treatment choices for cohorts of similar patients based on observational data from electronic health records (EHRs), a machine-learning precision cohort treatment option (PCTO) workflow consisting of (1) data extraction, (2) similarity model training, (3) precision cohort identification, and (4) treatment options analysis was developed. The similarity model is used to dynamically create a cohort of similar patients, to inform clinical deci… Show more

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Cited by 26 publications
(34 citation statements)
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References 47 publications
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“…A clinician can use population-level data case-by-case, assisted by machine. We did not only rely on the DI-VNN and PC-RF models but also datasets to estimate the model performances at individual level based on subpopulation similar to that individual, 56 collaborating machine learning and evidence-based medicine. 57…”
Section: Discussionmentioning
confidence: 99%
See 1 more Smart Citation
“…A clinician can use population-level data case-by-case, assisted by machine. We did not only rely on the DI-VNN and PC-RF models but also datasets to estimate the model performances at individual level based on subpopulation similar to that individual, 56 collaborating machine learning and evidence-based medicine. 57…”
Section: Discussionmentioning
confidence: 99%
“…24 Our models also used a cohort paradigm to prevent temporal bias in the delivery prediction. 45 We did not only rely on the DI-VNN and PC-RF models but also datasets to estimate the model performances at the individual level based on subpopulations similar to that individual, 46 in a collaboration of machine learning and evidence-based medicine. 47 This framework also answers key challenges to evaluate model weaknesses, 48 verify if the predicted outcome is reasonable, 49 and make sensible clinical predictions by utilizing electronic medical records.…”
Section: Discussionmentioning
confidence: 99%
“…This study extends existing works by considering patients’ HbA 1c trajectories in addition to clinical profile when identifying similar patients. In contrast to studies 20 , 21 that provide recommendations for medications type only, our study provides both medication type and dosage recommendations. Integrating dosage recommendation increases the complexity of medication recommendation system as titration of dosages need to take into consideration the age of a patient, their clinical profile, and/or other interacting medications 31 .…”
Section: Discussionmentioning
confidence: 99%
“…The similarity of diseases is based on their respective ICD-10 similarity (using the ICD-10 coding tree structure). Ng et al [34] presented an insightful method based on a precision cohort (ie, patient-similarity cohorts) to help clinicians make treatment decisions for chronic diseases. They trained a global similarity model on a set of thousands of predefined variables (disease variables were constructed using their ICD-9 and ICD-10 codes, laboratory variables with their Logical Observation Identifiers Names and Codes, etc) that learns a disease-specific distance (for the 3 chronic diseases presented: hypertension, type 2 diabetes mellitus, and hyperlipidemia), with significant manual work to build the training data set.…”
Section: Comparison With Previous Workmentioning
confidence: 99%