2014
DOI: 10.1186/1742-4682-11-s1-s8
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Pathway landscapes and epigenetic regulation in breast cancer and melanoma cell lines

Abstract: BackgroundEpigenetic variation is a main regulation mechanism of gene expression in various cancer histotypes, and due to its reversibility, the potential impact in therapy can be very relevant.MethodsBased on a selected pair, breast cancer (BC) and melanoma, we conducted inference analysis in parallel on a few cell lines (MCF-7 for BC and A375 for melanoma). Starting from differential expression after treatment with a demethylating agent, the 5-Aza-2'-deoxycytidine (DAC), we provided pathway enrichment analys… Show more

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Cited by 9 publications
(4 citation statements)
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References 77 publications
(78 reference statements)
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“…MiR-27 promotes human malignant melanoma cell metastasis by inducing the epithelial-to-mesenchymal transition [23,24]. NRP1 enhances signaling in three major pathways that have been linked to EMT, i.e., TGF-β, Hh and HGF/cMet [25][26][27][28][29][30]. In the previous study, over-expressed NRP1 promoted EMT and si-NRP1 restrained EMT was found in malignant melanoma, whereas the forced expression of miR-365 inhibited EMT.…”
Section: Discussionmentioning
confidence: 99%
“…MiR-27 promotes human malignant melanoma cell metastasis by inducing the epithelial-to-mesenchymal transition [23,24]. NRP1 enhances signaling in three major pathways that have been linked to EMT, i.e., TGF-β, Hh and HGF/cMet [25][26][27][28][29][30]. In the previous study, over-expressed NRP1 promoted EMT and si-NRP1 restrained EMT was found in malignant melanoma, whereas the forced expression of miR-365 inhibited EMT.…”
Section: Discussionmentioning
confidence: 99%
“… 15 , 40 42 Among the candidate tumor related new biomarkers, MrgprF, a MAS related GPR family member, was revealed to be downregulated in CM due to the hypermethylation in its promoter region, which could be reversed by 5-Azacytidine treatment, a well-known anti-cancer drug. 43 , 44 Consistently, 5-Azacytidine has previously been shown to behave as an anti-neoplastic agent for B16 melanoma. 45 , 46…”
Section: Discussionmentioning
confidence: 76%
“…At low doses, DNA synthesis is continued, while DNA–DNMT1 adduct bonds are being degraded and repaired, resulting in systematically hypomethylated DNA [41,42]. Studies show that DAC has effects on melanoma via decreasing cell growth and invasion [43] as well as alerting gene expression, includes tumor suppressor genes [44].…”
Section: Introductionmentioning
confidence: 99%