We show that the smallest module of Plasmodium falciparum AMA1 (PfAMA1) that can be expressed in the yeast Pichia pastoris while retaining the capacity to induce high levels of parasite-inhibitory antibodies comprises domains I and II. Based on this, two fusion proteins, differing in the order of the modules, were The annual malaria burden of 300 to 500 million clinical cases results in an estimated mortality for up to 2 million people, predominantly sub-Saharan African children under 5 years of age (52). A malaria vaccine would make a significant contribution to reducing the enormous socioeconomic burden caused by this disease. A number of vaccine approaches, targeting various stages of the complex parasite life cycle, are being investigated (21). Apical membrane antigen 1 (AMA1) and merozoite surface protein 1 (MSP1) are potential vaccine components, and a number of vaccines using elements of these molecules are currently in early clinical evaluation. Previous research has indicated that a combination of MSP1 and AMA1 has vaccine-related advantages over either antigen alone (3, 55). Both molecules are essential components of the asexual blood-stage merozoite (50, 60), the developmental stage of the parasite stage responsible for invasion of erythrocytes. They are also both present on merozoites that emerge from infected liver cells, and AMA1 has also been identified as a sporozoite protein (51). Plasmodium falciparum AMA1 (PfAMA1) is a polymorphic protein; over 10% of its amino acid residues can change without obvious effects on its function in invasion. With few exceptions, polymorphic residues are bi-or trimorphic, and all are located on the outside of the molecule, predominantly on one face (47). One strategy to tackle any potential negative effect of polymorphism in vaccine development is to combine PfAMA1 with other targets that are not, or are less, polymorphic, such as MSP1 19 (59). A single-protein vaccine has cost, speed, and potential functionality benefits compared with vaccines prepared from mixtures of proteins. We have therefore investigated how minimal elements of AMA1 and MSP1, each retaining the ability to induce growth-inhibitory antibodies, can be incorporated into fusion proteins that allow the development of single-protein, multitarget malaria vaccines.Micronemes are organelles of the merozoite apical complex, a structure intimately associated with the invasion of erythrocytes. AMA1 is initially trafficked to micronemes as an 83-kDa type 1 integral membrane protein; subsequently, the N-terminal prodomain is proteolytically cleaved prior to relocalization to the merozoite outer membrane (43). Further cleavage, proximal to the transmembrane region, then releases the ectodomain from the parasite surface (26). AMA1 contains 16 conserved cysteine residues that form eight intramolecular disulfide bonds (20). The recently elucidated three-dimensional structure of AMA1 (47) confirms that after cleavage of the prodomain, the ectodomain essentially comprises three interacting domains (DI, DII, and D...