Paracoccus a cridae sp. nov., isolated from the insect Acrida cinerea living in deserted cropland

Shuai, Zhang; Gan, Longzhan; Qin, Qiumian; Long, Xiufeng; Zhang, Yuqin; Chu, Yiwen; Tian, Yongqiang

doi:10.1099/ijsem.0.001222

Cited by 21 publications

(8 citation statements)

References 48 publications

(42 reference statements)

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Table 1. Differentiating characteristics of strain 960558 T and the most closely related genera of the family Rhodobacteraceae Taxa: 1, strain 960558 T (in this study); 2, Planktotalea [40][41][42]; 3, Nioella [43][44][45][46]; 4, Paracoccus [47][48][49][50][51][52]; 5, Pseudohalocynthiibacter [12]; 6, Pacificibacter [53][54][55][56]. For genera 2-6, all data are obtained from previous studies.…”

Section: Description Of Abyssibius Gen Novmentioning

confidence: 61%

Abyssibius alkaniclasticus gen. nov., sp. nov., a novel member of the family Rhodobacteraceae, isolated from the Mariana Trench

Wei

Fan

Quan

2023

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

A Gram-stain-negative bacterium with rod-shaped or irregular cells approximately 0.5–0.9×2.0–3.8 µm in size, designated as 960558T, was isolated from sediment sampled in the Mariana Trench. Strain 960558T grows at 4–37 °C (optimum, 28 °C), pH 6–7 (optimum, pH 7) and in the presence of 1–5 % (w/v) NaCl (optimum, 3 %). Strain 960558T utilizes tetradecane or hexadecane as a sole carbon and energy source, respectively. Phylogenetic trees based on 16S rRNA gene sequences and phylogenomic reconstruction revealed a close phylogenetic relationship between strain 960558T and members of the family Rhodobacteraceae by forming a separate branch within the type species of closely related genera. The validly published species that is most closely related to strain 960558T is Planktotalea lamellibrachiae JAM 119T, which has the highest 16S rRNA gene sequence similarity (93.47 %). Ubiquinone 10 is the predominant ubiquinone, while C16 : 0, 11-methyl C18 : 1 ω7c and C18 : 1 ω7c and/or C18 : 1 ω6c are the predominant fatty acids (>10 %). Additionally, phosphatidylglycerol, glycolipids, diphosphatidylglycerol, unidentified polar lipids and unidentified aminolipids are the major polar lipids. The DNA G+C content of strain 960558T is 61 %. Average nucleotide identity and digital DNA–DNA hybridization results of strain 960558T with other type strains are <70.2 and 22.1 %, respectively. Based on its phylogenetic, chemotaxonomic and other phenotypic properties, strain 960558T is considered to represent a novel genus and species within the family Rhodobacteraceae , for which the name Abyssibius alkaniclasticus gen. nov., sp. nov. is proposed. The type strain of Abyssibius alkaniclasticus is 960558T (=KCTC 82619T=MCCC 1K04727T).

show abstract

Section: Description Of Abyssibius Gen Novmentioning

confidence: 61%

Abyssibius alkaniclasticus gen. nov., sp. nov., a novel member of the family Rhodobacteraceae, isolated from the Mariana Trench

Wei

Fan

Quan

2023

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

show abstract

“…There is no information about the functional roles of the Romboutsia members as gut symbionts; however they seem to be well adapted to live within animal guts [65,68]. Similarly, members of Paracoccus, Methylobacterium and Ignavibacterium are regular habitants of arthropod guts [69][70][71]. We infer that most abundant bacteria genera found in this study, with the exclusion of Wolbachia, are likely residents of the M. velezangeli gut lumen and may be involved in important biological processes for this plant bug.…”

Section: Discussionmentioning

confidence: 76%

Diversity of bacterial symbionts associated with the tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) revealed by high-throughput 16S rRNA sequencing.

Navarro-Escalante¹,

Benavides²,

Acevedo³

2022

Preprint

View full text Add to dashboard Cite

Insects and microbes have developed complex symbiotic relationships that evolutively and ecologically play beneficial roles for both, the symbiont and the host. In most Hemiptera insects, bacterial symbionts offer mainly nutritional, defense and reproductive roles and have promoted the adaptive radiation of several hemipteran phytophagous lineages. The tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) is a polyphagous herbivore considered an important insect pest for several economically-relevant tropical crops; however, information about the composition of its bacterial microbiota was missing. In this study, we describe the diversity and structure of the bacterial microbiota in the nymph and adult life stages of M. velezangeli using Illumina high-throughput sequencing of 16S ribosomal RNA gene amplicons (meta-barcoding). We found that both insect life stages share a similar microbiota in terms of bacterial diversity and community structure. The intracellular symbiont Wolbachia (~92%) dominated the overall microbiome composition in these life stages, followed by the potential gut-associated bacteria genera Romboutsia (1.8%), Ignavibacterium (0.8%) and Clostridium (0.70%) as the top most abundant taxa. The persistent presence of bacterial genera Romboutsia , Ignavibacterium, Clostridium, Paracoccus, Allobaculum, Methylobacterium, Sediminibacterium, Faecalibaculum, Faecalibacterium, Collinsella, Rothia and Sphingomonas suggest these are members of the core microbiota and could play important biological roles for M. velezangeli . This data opens new questions and avenues to better understand the contribution of symbiotic bacteria in the biological performance of this insect pest.

show abstract

“…There is no information about the functional roles of the Romboutsia members as gut symbionts; however they seem to be well adapted to live within animal guts (Gerritsen et al 2017(Gerritsen et al , 2019. Similarly, members of Paracoccus, Methylobacterium and Ignavibacterium are regular habitants of arthropod guts (Zhang et al 2016(Zhang et al , 2018Sajnaga et al 2022). We infer that most abundant bacteria genera found in this study, with the exclusion of Wolbachia, are likely residents of the M. velezangeli gut lumen and may be involved in important biological processes for this plant bug.…”

Section: Discussionmentioning

confidence: 76%

Diversity of bacterial symbionts associated with the tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) revealed by high-throughput 16SrRNA sequencing.

Navarro-Escalante¹,

Benavides²,

Acevedo³

2022

Preprint

View full text Add to dashboard Cite

Insects and microbes have developed complex symbiotic relationships that evolutively and ecologically play beneficial roles for both, the symbiont and the host. In most Hemiptera insects, bacterial symbionts offer mainly nutritional, defense and reproductive roles and have promoted the adaptive radiation of several hemipteran phytophagous lineages. The tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) is a polyphagous herbivore considered an important insect pest for several economically-relevant tropical crops; however, information about the composition of its bacterial microbiota was missing. In this study, we describe the diversity and structure of the bacterial microbiota in the nymph and adult life stages of M. velezangeli using Illumina high-throughput sequencing of 16S ribosomal RNA gene amplicons (meta-barcoding). We found that both insect life stages share a similar microbiota in terms of bacterial diversity and community structure. The intracellular symbiont Wolbachia (~92%) dominated the overall microbiome composition in these life stages, followed by the potential gut-associated bacteria genera Romboutsia (1.8%), Ignavibacterium (0.8) and Clostridium (0.70%) as the top most abundant taxa. The persistent presence of bacterial genera Romboutsia, Ignavibacterium, Clostridium, Paracoccus, Allobaculum, Methylobacterium, Sediminibacterium, Faecalibaculum, Faecalibacterium, Collinsella, Rothia and Sphingomonas may suggest these are members of the core microbiota and could play important biological roles for M. velezangeli. This data opens new questions and avenues to better understand the contribution of symbiotic bacteria in the biological performance of this insect pest and provide bases to explore other insect control methods.

show abstract

Paracoccus a cridae sp. nov., isolated from the insect Acrida cinerea living in deserted cropland

Abstract: A Gram-stain-negative, aerobic, rod-shaped, non-motile bacterial strain, designated SCU-M53

Cited by 21 publications

References 48 publications

Abyssibius alkaniclasticus gen. nov., sp. nov., a novel member of the family Rhodobacteraceae, isolated from the Mariana Trench

Abyssibius alkaniclasticus gen. nov., sp. nov., a novel member of the family Rhodobacteraceae, isolated from the Mariana Trench

Diversity of bacterial symbionts associated with the tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) revealed by high-throughput 16S rRNA sequencing.

Diversity of bacterial symbionts associated with the tropical plant bug Monalonion velezangeli (Hemiptera: Miridae) revealed by high-throughput 16SrRNA sequencing.

Contact Info

Product

Resources

About