Papillibacter cinnamivorans gen. nov., sp. nov., a cinnamate-transforming bacterium from a shea cake digester.

Defnoun, Sabria; Labat, Marc; Ambrosio, M.; Garcia, Jean‐Louis; Patel, Bharat K. C.

doi:10.1099/00207713-50-3-1221

Cited by 49 publications

(34 citation statements)

References 26 publications

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“…Characteristics are scored as follows: +, positive; 2, negative; D, straindependent; ND, not determined. Data for Fastidiosipila sanguinis are from the present study and data for the other taxa are from Cato et al (1986), Defnoun et al (2000), Duncan et al (2002), Madden et al (1982), Monserrate et al (2001), Murray et al (1984), Patel et al (1980), Petitdemange et al (1984), Yang et al (1990) and Zellner et al (1996). (1000 mg) and vancomycin (5 mg), but resistant to colistin sulfate (10 mg) and metronidazole (5 mg) identification discs.…”

Section: Description Of Fastidiosipila Sanguinis Sp Novmentioning

confidence: 75%

Fastidiosipila sanguinis gen. nov., sp. nov., a new Gram-positive, coccus-shaped organism from human blood

Falsen

Collins

Welinder‐Olsson

et al. 2005

International Journal of Systematic and Evolutionary Microbiology

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Section: Description Of Fastidiosipila Sanguinis Sp Novmentioning

confidence: 75%

Fastidiosipila sanguinis gen. nov., sp. nov., a new Gram-positive, coccus-shaped organism from human blood

Falsen

Collins

Welinder‐Olsson

et al. 2005

International Journal of Systematic and Evolutionary Microbiology

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“…strain D1227 (21) and R. palustris (19). Alcanivorax borkumensis MBIC 4326 (18) and Papillibacter cinnamivorans (15) have transformed cinnamic acid to benzoic acid. Whether the ␤-oxidative pathway or non-␤-oxidative pathway is used by these strains is unclear.…”

mentioning

confidence: 99%

Isolation and Characterization of Thermophilic Bacilli Degrading Cinnamic, 4-Coumaric, and Ferulic Acids

Peng

Misawa

Harayama

2003

Appl Environ Microbiol

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Thirty-four thermophilic Bacillus sp. strains were isolated from decayed wood bark and a hot spring water sample based on their ability to degrade vanillic acid under thermophilic conditions. It was found that these bacteria were able to degrade a wide range of aromatic acids such as cinnamic, 4-coumaric, 3-phenylpropionic, 3-(p-hydroxyphenyl)propionic, ferulic, benzoic, and 4-hydroxybenzoic acids. The metabolic pathways for the degradation of these aromatic acids at 60°C were examined by using one of the isolates, strain B1. Benzoic and 4-hydroxybenzoic acids were detected as breakdown products from cinnamic and 4-coumaric acids, respectively. The ␤-oxidative mechanism was proposed to be responsible for these conversions. The degradation of benzoic and 4-hydroxybenzoic acids was determined to proceed through catechol and gentisic acid, respectively, for their ring fission. It is likely that a non-␤-oxidative mechanism is the case in the ferulic acid catabolism, which involved 4-hydroxy-3-methoxyphenyl-␤-hydroxypropionic acid, vanillin, and vanillic acid as the intermediates. Other strains examined, which are V0, D1, E1, G2, ZI3, and H4, were found to have the same pathways as those of strain B1, except that strains V0, D1, and H4 had the ability to transform 3-hydroxybenzoic acid to gentisic acid, which strain B1 could not do.

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“…S. termitidis is a chemoorganotroph that grows exclusively on a limited range of methoxylated aromatic compounds including 3,4,5-trimethoxybenzoate and 3,4,5-cinnamate with ring cleavage and produces acetate as a major end product, suggesting that this bacterium may contribute, in part, to the degradation of lignocellulosic matter in the digestive tract of the termite (Grech-Mora et al, 1996). P. cinnamivorans is a strictly anaerobic bacterium that has been isolated from anaerobic digester sludge and is capable of metabolizing several methoxycinnamates (Defnoun et al, 2000).…”

mentioning

confidence: 99%

Flow cytometric sorting, phylogenetic analysis and in situ detection of Oscillospira guillermondii, a large, morphologically conspicuous but uncultured ruminal bacterium

Yanagita

Manome

Meng

et al. 2003

International Journal of Systematic and Evolutionary Microbiology

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Flow cytometric sorting based on its large cell size enabled an enriched fraction of Oscillospira guillermondii cells to be obtained from the rumen contents of a sheep. Phylogenetic analysis based on cloned 16S rDNA sequences indicated that the bacterium is a member of the low-G+C Gram-positive bacterial cluster. Sporobacter termitidis and Papillibacter cinnamivorans were the most closely related known species, with sequence similarities of only 86?3-88?1 %. Fluorescently labelled 16S rRNA-targeted oligonucleotide probes specific for Oscillospira were designed and applied to the rumen sample from which the enriched fraction was obtained. The probes hybridized specifically with the large, morphologically conspicuous Oscillospira cells.Oscillospira guillermondii is a large bacterium (3-66 10-40 mm), often observed in the rumen contents of sheep and cattle as well as the alimentary tract of other herbivorous animals. Oscillospira is characterized as a Grampositive bacterium, with closely spaced transverse septa and endospores (Gibson, 1974(Gibson, , 1986Grain & Senaud, 1976;Stewart et al., 1997). Although this bacterium was first described almost a century ago (Chatton & Pérard, 1913), growth in pure culture has not been reported (Gibson, 1974(Gibson, , 1986Stewart et al., 1997), hence, little is known of its ecological role and physiological properties in the intestinal tract. Clarke (1979) found that Oscillospira and other large bacteria attached rapidly to the cuticular surface of clover and grass leaves in the rumen, suggesting that the cuticle of green leaves constitutes a specific niche for these bacteria. Warner (1966) investigated the relationship between grazing behaviour and changes in rumen microbial populations in sheep and found that the population of Oscillospira in the rumen fluctuated and the length of the trichome also changed depending upon the amount of feed consumed. Kurihara et al. (1968) reported that total counts of Oscillospira in the sheep rumen tended to decrease in the presence of ciliates. Although the number of Oscillospira cells is relatively small compared with other bacterial cells, they may make a significant contribution to rumen fermentation because of their large biomass, roughly equivalent to that of ruminal ciliate protozoa (Clarke, 1979;Williams & Coleman, 1997).To date, culture-based techniques have not enabled the phylogenetic relatedness of Oscillospira to known bacteria to be studied. Flow cytometry (FCM), a well-established technology in cell biology and medical microbiology, is now being applied to microbial ecology studies. FCM allows the rapid analysis of bacterial communities and enables single cells to be detected, quantified and sorted according to differences in size, DNA content or phylogenetic affiliation as assessed by fluorescently labelled rRNA-targeted oligonucleotide probes (Amann et al., 1990;Button et al., 1996;Davey & Kell, 1996;Jansson & Prosser, 1997;Wallner et al., 1997). Very recently, Zoetendal et al. (2002) have detected and enumerated uncultured R...

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Papillibacter cinnamivorans gen. nov., sp. nov., a cinnamate-transforming bacterium from a shea cake digester.

Cited by 49 publications

References 26 publications

Fastidiosipila sanguinis gen. nov., sp. nov., a new Gram-positive, coccus-shaped organism from human blood

Fastidiosipila sanguinis gen. nov., sp. nov., a new Gram-positive, coccus-shaped organism from human blood

Isolation and Characterization of Thermophilic Bacilli Degrading Cinnamic, 4-Coumaric, and Ferulic Acids

Flow cytometric sorting, phylogenetic analysis and in situ detection of Oscillospira guillermondii, a large, morphologically conspicuous but uncultured ruminal bacterium

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