1999
DOI: 10.1006/cbmr.1999.1508
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PALIREL, a Computer Program for Analyzing Particle-to-Membrane Relations, with Emphasis on Electron Micrographs of Immunocytochemical Preparations and Gold Labeled Molecules

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Cited by 15 publications
(12 citation statements)
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References 30 publications
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“…1.0.2 (i.e., SYNBIN; Fig. 2), on the basis of principles regarding proximity to membranes articulated by Ottersen and colleagues (40,41). Accordingly, the position of each gold particle is determined as it relates to the post-and presynaptic membrane structures.…”
Section: Methodsmentioning
confidence: 99%
“…1.0.2 (i.e., SYNBIN; Fig. 2), on the basis of principles regarding proximity to membranes articulated by Ottersen and colleagues (40,41). Accordingly, the position of each gold particle is determined as it relates to the post-and presynaptic membrane structures.…”
Section: Methodsmentioning
confidence: 99%
“…6 Particles within 50 nm from the membrane were counted, allowing computation of linear density (number per m) by use of the PALIREL program. 15 Membrane fragments were classified as those facing capillaries or a neighboring myocyte ("nondisk") and as those engaged in intercalated disks, excluding desmosomes and gap junctions ("disk"). Density (particles per m 2 ) of the total number of gold particles within "disk fields," defined as the area delimited by the borders between the dense filamentous masses of fascia adherens and the adjoining myofilaments, was computed with the MORFOREL program.…”
Section: Methodsmentioning
confidence: 99%
“…Density (particles per m 2 ) of the total number of gold particles within "disk fields," defined as the area delimited by the borders between the dense filamentous masses of fascia adherens and the adjoining myofilaments, was computed with the MORFOREL program. 15 3.Lactate transport into cardiomyocytes (CHF, nϭ4 and Sham, nϭ4 rats) was determined in cells loaded with BCECF acetoxymethyl ester (Molecular Probes Inc). 16,17 Between 2 and 5 cells were exposed to alternating (2 Hz) 440-and 490-nm excitation wavelengths (Delta-Scan, Photon Technology International Inc).…”
Section: Methodsmentioning
confidence: 99%
“…Sub-Synaptic distribution of pLIMK-The immunogold particle density and distribution in various compartments was analyzed using SYNBIN software (Adams et al, 2001c, Adams et al, 2002, Adams et al, 2004, that is based on principles regarding proximity to membranes articulated by Ruud (Ruud and Blackstad, 1999). Accordingly, the position of each gold particle was determined as it relates to the postsynaptic and presynaptic membrane structures.…”
Section: Post-embedding Electron Microscopymentioning
confidence: 99%