Optimized Python library for reconstruction of ensemble-based gene co-expression networks using multi-GPU
Aurelio López-Fernández,
Francisco A. Gómez-Vela,
María del Saz-Navarro
et al.
Abstract:Gene co-expression networks are valuable tools for discovering biologically relevant information within gene expression data. However, analysing large datasets presents challenges due to the identification of nonlinear gene–gene associations and the need to process an ever-growing number of gene pairs and their potential network connections. These challenges mean that some experiments are discarded because the techniques do not support these intense workloads. This paper presents pyEnGNet, a Python library tha… Show more
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