The Irrawaddy dolphin (
Orcaella brevirostris
) is an endangered,
small cetacean species which is widely distributed in rivers, estuaries, and
coastal waters throughout the tropical and subtropical Indo-Pacific. Despite the
extensive distribution of this species, little is known of individual movements
or genetic exchange among regions in Thailand. Here, we evaluate the genetic
diversity and genetic structure of
O. brevirostris
in the
eastern, northern and western Gulf of Thailand, and Andaman Sea. Although
phylogenetic relationships and network analysis based on 15 haplotypes obtained
from 32 individuals reveal no obvious divergence, significant genetic
differentiation in mitochondrial DNA (overall F
ST
= 0.226, P <
0.001; Φ
ST
= 0.252, P < 0.001) is apparent among regions. Of 18
tested microsatellite loci, 10 are polymorphic and successfully characterized in
28 individuals, revealing significant genetic differentiation (overall
F
ST
= 0.077, P < 0.05) among the four sampling sites.
Structure analysis reveals two inferred genetic clusters. Additionally, Mantel
analysis demonstrates individual-by-individual genetic distances and geographic
distances follow an isolation-by-distance model. We speculate that the
significant genetic structure of
O. brevirostris
in Thailand is
associated with a combination of geographical distribution patterns,
environmental and anthropogenic factors, and local adaptations.