“…HIV-1 is characterized by extensive genetic diversity within and between hosts, but distinct processes and rates shape viral evolution at these levels 35 [2, 3, 14, 15]. While within-host evolutionary dynamics are dominated by selective forces and competitive fitness ( Figure 2) [2], between-host evolution is considered to be largely shaped by neutral processes and multiple HIV-1 variants co-exist at the epidemiological level, although recent findings might imply more selective action at this level than generally assumed [16,17]. Circulating 40 viral diversity at population level is an intrinsic reflection of transmission dynamics within the epidemic [2], but virus and host genetics additionally impact between-host dynamics [10,18,19,5,20,2,21].…”