For a subgroup L of the symmetric group S , we determine the minimal base size of GL d (q) L acting on V d (q) as an imprimitive linear group. This is achieved by computing the number of orbits of GL d (q) on spanning m-tuples, which turns out to be the number of d-dimensional subspaces of Vm(q). We then use these results to prove that for certain families of subgroups L, the affine groups whose stabilisers are large subgroups of GL d (q) L satisfy a conjecture of Pyber concerning bases.Mathematics Subject Classification. Primary 15A04, 20B15.