The hypothesis that Enterococcus faecalis resists common intracanal medications by forming biofilms was tested. E. faecalis colonization of 46 extracted, medicated roots was observed with scanning electron microscopy (SEM) and scanning confocal laser microscopy. SEM detected colonization of root canals medicated with calcium hydroxide points and the positive control within 2 days. SEM detected biofilms in canals medicated with calcium hydroxide paste in an average of 77 days. Scanning confocal laser microscopy analysis of two calcium hydroxide paste medicated roots showed viable colonies forming in a root canal infected for 86 days, whereas in a canal infected for 160 days, a mushroom-shape typical of a biofilm was observed.Analysis by sodium dodecyl sulfate polyacrylamide gel electrophoresis showed no differences between the protein profiles of bacteria in freefloating (planktonic) and inoculum cultures. Analysis of biofilm bacteria was inconclusive.These observations support potential E. faecalis biofilm formation in vivo in medicated root canals.The most common reasons for failures in conservative root canal therapy are related to problems in instrumentation. However, occasionally, bacteria resistant to conservative therapy may also be involved (1). "Bacteria-associated endodontic failures together with pulp-periapical infections refractory to conventional treatment represent the unresolved bacteriological problems in endodontics" (2). Numerous studies have shown that persistent endodontic infections are often caused by Enterococcus faecalis (1, 3).Virulence factors of E. faecalis, such as hemolysin, gelatinase, and enterococcal aggregation substance (EAS) play an important role in the bacterium's pathogenesis (4). However, the mechanism through which E. faecalis persists in the root canal is not well understood. E. faecalis seems to be highly resistant to the medications used during treatment and is one of the few organisms that has been shown to resist the antibacterial effect of calcium hydroxide (5, 6). There is little research to explain why E. faecalis is resistant to root canal therapy. It is easily destroyed when grown in vitro, but it becomes resistant when present in the environment of the root canal system (7). Therefore, E. faecalis must undergo some type of change while in the root canal system, possibly activating some virulence factor that makes it more resistant. Alternatively, it may form a biofilm.Biofilms, also known as plaque, are complex communities of bacteria embedded in a polysaccharide matrix (8). Suspended, i.e. planktonic, bacteria that are either leaving or joining the biofilm surround the biofilm. The growth conditions vary between biofilm and planktonic environments. For this reason, proteins expressed by biofilm bacteria may differ from those expressed by their planktonic counter parts, and both the biofilm bacteria and the planktonic bacteria may differ from bacteria maintained in the laboratory.The purpose of this study was to test the hypothesis that E. faecalis forms a biofi...