Microbial co-culture fermentations
can improve chemical production
from complex biosynthetic pathways over monocultures by distributing
enzymes across multiple strains, thereby reducing metabolic burden,
overcoming endogenous regulatory mechanisms, or exploiting natural
traits of different microbial species. However, stabilizing and optimizing
microbial subpopulations for maximal chemical production remains a
major obstacle in the field. In this study, we demonstrate that optogenetics
is an effective strategy to dynamically control populations in microbial
co-cultures. Using a new optogenetic circuit we call OptoTA, we regulate
an endogenous toxin-antitoxin system, enabling tunability of Escherichia coli growth using only blue light. With this
system we can control the population composition of co-cultures of E. coli and Saccharomyces cerevisiae. When introducing in each strain different metabolic modules of
biosynthetic pathways for isobutyl acetate or naringenin, we found
that the productivity of co-cultures increases by adjusting the population
ratios with specific light duty cycles. This study shows the feasibility
of using optogenetics to control microbial consortia populations and
the advantages of using light to control their chemical production.