The urate oxidase (UO) gene of Drosophila melanogaster is expressed during the third-instar larval and adult stages, exclusively within a subset of cells of the Malpighian tubules. The UO gene contains a 69-base-pair intron and encodes mature mRNAs of 1,224, 1,227, and 1,244 nucleotides, depending on the site of 3' endonucleolytic cleavage prior to polyadenylation. A direct repeat, 5'-AAGTGAGAGTGAT-3', is the proposed cis-regulatory element involved in 20-hydroxyecdysone repression of the UO gene. The deduced amino acid sequences of UO of D. melanogaster, rat, mouse, and pig and uricase II of soybean show 32 to 38% identity, with 22% of amino acid residues identical in all six species. With use of P-element-mediated germ line transformation, 826 base pairs 5' and approximately 1,200 base pairs 3' of the D. melanogaster UO transcribed region contain all of the cis elements allowing for appropriate temporal regulation and Malpighian tubule-specific expression of the UO gene.In Drosophila melanogaster, particular purines serve as precursors of nucleotides and pterins (35,62). Excess purine is converted to uric acid, which is either stored, excreted, or catabolized, depending on the developmental stage. Uric acid in the third-instar larva and adult is converted by urate oxidase (UO) to allantoin and then excreted by the Malpighian tubules (19,40). The gene encoding UO is transcribed exclusively within the cells of the Malpighian tubules. UO mRNA is not detected by Northern (RNA) analysis until the beginning of the third-instar larval stage; by the middle of this stage, UO mRNA represents approximately 1% of the total poly(A)+ RNA of the Malpighian tubules (40). By the end of the third-instar larval stage, UO mRNA and UO protein abruptly disappear in response to a rising concentration of the steroid hormone 20-hydroxyecdysone (41). The UO gene remains transcriptionally inactive from the late-third instar larval stage through the pupal stage, with UO mRNA reappearing exclusively within the Malpighian tubules after emergence of the adult (40).Though the molecular mechanisms are unknown, two experimentally distinguishable phenomena are involved in this reactivation of transcription of the UO gene in the adult: a UO-inducing factor in the hemolymph and an autonomous clock-like mechanism in the Malpighian tubules. The UOinducing factor was first detected in xanthine dehydrogenase-deficient Drosophila, strains ry2 (3-52.0; 24) and ma-i (1-64.8; 9), which have 5-to 10-fold-higher levels of UO mRNA and UO protein in the adult than in the wild-type adult. High levels of UO-inducing factor in the hemolymph of a xanthine dehydrogenase-deficient adult stimulated a 5-to 10-fold increase in UO activity in a wild-type Malpighian tubule transplanted into the abdomen of a xanthine dehydrogenase-deficient adult (19,21,41