New Polymorphic Microsatellite Loci for the Zebra Mussel<i>Dreissena polymorpha</i>(Pallas, 1771), a Common Bioindicator

Thomas, Godila; Hammouti, Nasera; Seitz, Alfred

doi:10.2983/035.030.0118

Cited by 10 publications

(10 citation statements)

References 18 publications

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“…However, despite the critical situation caused by the expansion of D . polymorpha across Europe and North America, only a few microsatellites have been described for this species [ 22 – 24 ] and their analyses have corroborated the results obtained by mitochondrial and allozyme markers [ 20 , 25 ].…”

Section: Introductionsupporting

confidence: 62%

“…This study presents a set of new polymorphic microsatellites in D . polymorpha ( Table 2 ), which, together with previously described microsatellites [ 22 – 24 ], represent a useful tool for investigating genetic variation within and among populations of this species.…”

Section: Discussionmentioning

confidence: 99%

“… Studies analyzed ( n ), SSR markers used and validation effort to get markers required in each genetic application using microsatellite markers. Validation effort was determined using the median values of the number of SSR used in each microsatellite-containing analysis according with 104 studies revised in Chistiakov et al [ 24 ]. The number of locus required to be validated were calculated using the median of SSR analyzed and the polymorphism yield (15.05%) calculated in this study.…”

Section: Discussionmentioning

confidence: 99%

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Using Massive Parallel Sequencing for the Development, Validation, and Application of Population Genetics Markers in the Invasive Bivalve Zebra Mussel (Dreissena polymorpha)

Peñarrubia¹,

Sanz²,

Plá³

et al. 2015

PLoS ONE

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The zebra mussel (Dreissena polymorpha, Pallas, 1771) is one of the most invasive species of freshwater bivalves, due to a combination of biological and anthropogenic factors. Once this species has been introduced to a new area, individuals form dense aggregations that are very difficult to remove, leading to many adverse socioeconomic and ecological consequences. In this study, we identified, tested, and validated a new set of polymorphic microsatellite loci (also known as SSRs, Single Sequence Repeats) using a Massive Parallel Sequencing (MPS) platform. After several pruning steps, 93 SSRs could potentially be amplified. Out of these SSRs, 14 were polymorphic, producing a polymorphic yield of 15.05%. These 14 polymorphic microsatellites were fully validated in a first approximation of the genetic population structure of D. polymorpha in the Iberian Peninsula. Based on this polymorphic yield, we propose a criterion for establishing the number of SSRs that require validation in similar species, depending on the final use of the markers. These results could be used to optimize MPS approaches in the development of microsatellites as genetic markers, which would reduce the cost of this process.

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Section: Introductionsupporting

confidence: 62%

Section: Discussionmentioning

confidence: 99%

Section: Discussionmentioning

confidence: 99%

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Using Massive Parallel Sequencing for the Development, Validation, and Application of Population Genetics Markers in the Invasive Bivalve Zebra Mussel (Dreissena polymorpha)

Peñarrubia¹,

Sanz²,

Plá³

et al. 2015

PLoS ONE

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“…In this equivalent circuit, Rt reflects the charge transfer resistance R 1 , R Ω is the resistance of the solution R 2 , and CPE is a constant phase element which replaces the pure capacitor. The impedance function of the CPE is as follows (11):…”

Section: Electrochemical Impedance Spectroscopy Measurementsmentioning

confidence: 99%

“…Acid inhibitors have wide applications in the industrial field as a component in pre-treatment composition, in cleaning solution for industrial equipment and in acidulations of oil wells and in petrochemical plants. The effect of organic compounds on the corrosion behaviour of metallic materials in aggressive solutions has been well documented 1,3-5, [10][11][12][13][14][15]. It was found that the organic compounds are effective corrosion inhibitors due to their ability to form an adsorbed film on the metal surface.…”

Section: Introductionmentioning

confidence: 99%

Thermodynamic Study and Characterization by Electrochemical Technique of Pyrazole Derivatives as Corrosion Inhibitors for C38 Steel in Molar Hydrochloric Acid

Ouali

Chetouani²,

Hammouti

et al. 2013

Port. Electrochim. Acta

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The effect of synthesized 1,1'-propane-1,3-diylbis[3-(chloromethyl)-5-methyl-1Hpyrazole], dimethyl 1,1'-butane-1,4-diylbis(5-methyl-1H-pyrazole-3-carboxylate) and 1,1'-butane-1,4-diylbis[3-(chloromethyl)-5-methyl-1H-pyrazole] on corrosion of C38 steel in hydrochloric acid solution has been investigated in the temperature range from 298 K to 328 K by weight loss, potentiodynamic polarization method and modelled with an equivalent electric circuit. All the compounds exhibited more than 90% anticorrosion activity, the highest is 96 % by 1,1'-butane-1,4-diylbis[3-(chloromethyl)-5-methyl-1H-pyrazole], and it has been shown that the inhibition efficiencies increased with the concentration of the inhibitors, remaining almost constant in a wide temperature range. Potentiodynamic polarization studies suggested that it is a predominance cathodic type. Nyquist plots showed depressed semicircles with their centre below the real axis. The adsorption on the C38 steel surface followed the Langmuir adsorption isotherm. The thermodynamic parameters for dissolution were investigated at different concentrations and temperature. The theoretical study by modelling the molecules of these inhibitors has been performed by considering the Density Functional Theory (DFT) using the Gaussian 03W suite of programs that can calculate the different quantum parameters such as E HOMO , E LUMO, ∆ E HOMO , E LUMO , and µ dipolar moment, allowing us to confirm the results found by the gravimetric and electrochemical methods.

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Journey into the past: using cryogenically stored samples to reconstruct the invasion history of the quagga mussel (Dreissena rostriformis) in German river systems

et al. 2014

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New Polymorphic Microsatellite Loci for the Zebra MusselDreissena polymorpha(Pallas, 1771), a Common Bioindicator

Cited by 10 publications

References 18 publications

Using Massive Parallel Sequencing for the Development, Validation, and Application of Population Genetics Markers in the Invasive Bivalve Zebra Mussel (Dreissena polymorpha)

Using Massive Parallel Sequencing for the Development, Validation, and Application of Population Genetics Markers in the Invasive Bivalve Zebra Mussel (Dreissena polymorpha)

Thermodynamic Study and Characterization by Electrochemical Technique of Pyrazole Derivatives as Corrosion Inhibitors for C38 Steel in Molar Hydrochloric Acid

Journey into the past: using cryogenically stored samples to reconstruct the invasion history of the quagga mussel (Dreissena rostriformis) in German river systems

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