New insights into the regulation mechanism of red claw crayfish (Cherax quadricarinatus) hepatopancreas under air exposure using transcriptome analysis

Lu, Yao-Peng; Zheng, Ping; Zhang, Xiuxia; Li, Juntao; Zhang, Ze-Long; Xu, Jia-Rui; Meng, Yongqi; Li, Jiajun; Xian, Jian-An; Wang, An‐Li

doi:10.1016/j.fsi.2022.108505

Cited by 2 publications

(1 citation statement)

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“…In commerce, fish and shrimps encounter environmental stresses of hypoxia during capture, loading and transport. And studying the physiological characteristics and performance of aquatic economic animals under hypoxic conditions can help improve their survival rates and reduce losses [ 43 , 44 ]. In evolutionary terms, air exposure stress also helps to explore potential mechanisms of aquatic to terrestrial evolution [ 45 ].…”

Section: Discussionmentioning

confidence: 99%

Chromosome-Level Genome Assembly of Protosalanx chinensis and Response to Air Exposure Stress

Zhou,

Zhang,

Tang

et al. 2023

Biology

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Protosalanx chinensis is a suitable particular species for genetic studies on nearly scaleless skin, transparency and high sensitivity to hypoxia stress. Here, we generated a high-quality chromosome-level de novo assembly of P. chinensis. The final de novo assembly yielded 379.47 Mb with 28 pseudo-chromosomes and a scaffold N50 length of 14.52 Mb. In total, 21,074 protein-coding genes were predicted. P. chinensis, Esox lucius and Hypomesus transpacificus had formed a clade, which diverged about 115.5 million years ago. In the air exposure stress experiment, we found that some genes play an essential role during P. chinensis hypoxia, such as bhlh, Cry1, Clock, Arntl and Rorb in the circadian rhythm pathway. These genomic data offer a crucial foundation for P. chinensis ecology and adaptation studies, as well as a deeper understanding of the response to air exposure stress.

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Section: Discussionmentioning

confidence: 99%