A new method to compute heat transfer coefficients of the profile extrusion process calibration stage, in conjunction with a prototype calibration system [1], is proposed. The methodology involves two major ingredients: a numerical modeling code and a fitting procedure. The code, based on the Finite Volume Method, computes the steadystate solution for the heat transfer problem. The software carefully handles discontinuous solutions as well as discontinuities of the velocity and the material characteristics. Fitting procedure introduces alternative algorithms we have tested and assessed in [2]. A real case study demonstrates the advantages of using the new proposed methodology when compared with the previously applied [1].