Neuronal calcium sensor (NCS) proteins transduce Ca2؉ signals and are highly conserved from yeast to humans. We determined NMR structures of the NCS-1 homolog from fission yeast (Ncs1), which activates a phosphatidylinositol 4-kinase. Ncs1 contains an ␣-NH 2 -linked myristoyl group on a long N-terminal arm and four EF-hand motifs, three of which bind Ca 2؉ , assembled into a compact structure. In Ca 2؉ -free Ncs1, the N-terminal arm positions the fatty acyl chain inside a cavity near the C terminus. The C14 end of the myristate is surrounded by residues in the protein core, whereas its amide-linked (C1) end is flanked by residues at the protein surface. In Ca 2؉ -bound Ncs1, the myristoyl group is extruded (Ca 2؉ -myristoyl switch), exposing a prominent patch of hydrophobic residues that specifically contact phosphatidylinositol 4-kinase. The location of the buried myristate and structure of Ca 2؉ -free Ncs1 are quite different from those in other NCS proteins. Thus, a unique remodeling of each NCS protein by its myristoyl group, and Ca 2؉ -dependent unmasking of different residues, may explain how each family member recognizes distinct target proteins.
Neuronal calcium sensor (NCS)2 proteins (1-3) are a conserved subclass of the calmodulin (CaM) superfamily that regulate signal transduction in the brain and retina. All members of the NCS family includes ϳ200 residues, are N-myristoylated on their ␣-NH 2 group, and possess four EF-hand motifs, but the first contains a diagnostic CPXG sequence that disables its ability to bind Ca 2ϩ (4,5). Recoverin, the most intensively studied NCS protein, is a Ca 2ϩ sensor in rod and cone cells, where it controls desensitization of rhodopsin (6 -9). The guanylate cyclase-activating proteins, GCAP1 (10) and GCAP2 (11), are NCS proteins also found in rods and cones, which regulate the recovery phase of visual excitation and are genetically linked to retinal diseases (12, 13). Brain NCS family members include neurocalcin (14), hippocalcin (15), visinin, and visinin-like proteins (16), KChIPs (17), and NCS-1 (also called frequenin) (18). Brain NCS proteins have diverse functions. Neurocalcins and visinin-like proteins regulate guanylate cyclase and nicotinamide acetylcholine receptors implicated in synaptic plasticity (16). KChIPs (17), hippocalcin (19), and NCS-1 (20) bind to various ion channels and thus control neuronal excitability.Remarkably, even the genomes of yeasts (Saccharomyces cerevisiae and Schizosaccharomyces pombe) encode a protein that is more than 60% identical to mammalian NCS-1 (Fig. 1A). The budding yeast (S. cerevisiae) homolog (Frq1) is essential for cell growth (21) and activates a PtdIns 4-kinase (Pik1) (22, 23). The fission yeast (S. pombe) homolog (Ncs1) regulates sporulation (24) and confers Ca 2ϩ tolerance (25). Sporulation defects in Ncs1 knock-out fission yeast are rescued by overexpressing S. cerevisiae Frq1 or Pik1, suggesting that Ncs1 activates the homologous S. pombe PtdIns 4-kinase. Indeed, the Frq1-binding site in Pik1 (26) is conserved in its ...