Synaptic cell adhesion molecules, including the neurexin ligands, neuroligins (NLs) and leucine-rich repeat transmembrane proteins (LRRTMs), are thought to organize synapse assembly and specify synapse function. To test the synaptic role of these molecules in vivo, we performed lentivirally mediated knockdown of NL3, LRRTM1, and LRRTM2 in CA1 pyramidal cells of WT and NL1 KO mice at postnatal day (P)0 (when synapses are forming) and P21 (when synapses are largely mature). P0 knockdown of NL3 in WT or NL1 KO neurons did not affect excitatory synaptic transmission, whereas P0 knockdown of LRRTM1 and LRRTM2 selectively reduced AMPA receptor-mediated synaptic currents. P0 triple knockdown of NL3 and both LRRTMs in NL1 KO mice yielded greater reductions in AMPA and NMDA receptor-mediated currents, suggesting functional redundancy between NLs and LRRTMs during early synapse development. In contrast, P21 knockdown of LRRTMs did not alter excitatory transmission, whereas NL manipulations supported a role for NL1 in maintaining NMDA receptor-mediated transmission. These results show that neurexin ligands in vivo form a dynamic synaptic cell adhesion network, with compensation between NLs and LRRTMs during early synapse development and functional divergence upon synapse maturation.hippocampus | neuropsychiatric disorders T he enormous processing power of the mammalian brain is the result of a vast network of precise synaptic connections, where functionally diverse presynaptic neurons establish synapses with specific properties onto select populations of postsynaptic cells. Neuroligins (NLs) and neurexins (NRXs) are a prototypical transsynaptic adhesion pair (1, 2) that is ideally situated to play important roles in such synaptic processes. Interactions between the four NLs (NL1-4) and the three NRXs are highly regulated at the level of alternative mRNA splicing, generating an intricate code that regulates both the affinity of interactions and the consequences on synapse specification (3, 4). Given the complexity of NL-NRX interactions, it was surprising to find that leucine-rich repeat transmembrane proteins (LRRTMs) are also high-affinity receptors for NRXs and share many of the binding characteristics of NLs (5-7).Functional studies of NLs and LRRTMs using overexpression in nonneuronal cells or cultured neurons showed that increases in the levels of these proteins generally increase the number of synapses (5,(8)(9)(10)(11)(12). Loss of function experiments aiming to address the requirement for NLs and LRRTMs in synapse formation and mature synaptic function have yielded inconsistent results depending on whether KO or knockdown (KD) approaches were used (6, 9-15). These discrepancies may reflect, in part, inherent differences between the preparations that were used. In particular, robust ongoing synaptogenesis in dissociated cultures and extensive circuit remodeling in slice culture preparations make it difficult to distinguish whether a manipulation affects synapse formation, synapse pruning, synapse maintenance, or mat...