-Neurexins and neuroligins are plasma membrane proteins that are displayed on the neuronal cell surface. We have now investigated the interaction of neurexin 1 with neuroligin 1 to evaluate their potential to function as heterophilic cell adhesion molecules. Using detergent-solubilized neuroligins and secreted neurexin 1-IgG fusion protein, we observed binding of these proteins to each other only in the presence of Ca 2؉ and in no other divalent cation tested. Only neurexin 1 lacking an insert in splice site 4 bound neuroligins, whereas neurexin 1 containing an insert was inactive. Halfmaximal binding required 1-3 M free Ca
2؉, which probably acts by binding to neuroligin 1 but not to neurexin 1. To determine if neurexin 1 and neuroligin 1 can also interact with each other when present in a native membrane environment on the cell surface, we generated transfected cell lines expressing neuroligin 1 and neurexin 1. Upon mixing different cell populations, we found that cells aggregate only if cells expressing neurexin 1 are mixed with cells expressing neuroligin 1. Aggregation was dependent on Ca 2؉ and was inhibited by the addition of soluble neurexin 1 lacking an insert in splice site 4 but not by the addition of neurexin 1 containing an insert in splice site 4. We conclude that neurexin 1 and neuroligin 1 (and, by extension, other -neurexins and neuroligins) function as heterophilic cell adhesion molecules in a Ca 2؉ -dependent reaction that is regulated by alternative splicing of -neurexins.Neurons in the brain are connected to each other by thousands of synapses, creating a dense network of communicating cells. Cell recognition processes between neurons are likely to contribute to the establishment and maintenance of this network, but little is known about the mechanisms involved. Neurexins constitute a family of polymorphic cell surface proteins that are candidates for mediating cell recognition between neurons (1, 2). Three mammalian genes for neurexins are known. Each gene has two promoters that drive the synthesis of long and short classes of transcripts (1-4). The long transcripts encode ␣-neurexins, and the short transcripts encode -neurexins. Both transcripts are detectable only in neurons (1, 5).␣-and -neurexins are type I membrane proteins that resemble cell surface receptors and are composed of canonical sets of domains. The extracellular sequences of ␣-neurexins contain a classical N-terminal signal peptide followed by six weakly homologous repeats with interspersed EGF 1 -like sequences. The six repeats are related to repeated sequences found in a number of proteins and were first described in the G domain of laminin A, sex hormone-binding globulin, and neurexins (1, 6, 7). For this reason we call these repeats LNS (laminin/neurexin/sex hormone-binding globulin) domains. In ␣-neurexins, EGF-like sequences are placed after the first, third, and fifth LNS domain. After the sixth LNS domain, ␣-neurexins contain a short serine/threonine-rich sequence that is probably O-glycosylated (4)....