Summary
Amyloidosis is a major problem in over one hundred diseases including Alzheimer's disease (AD). Using the iDISCO visualization method involving targeted molecular labeling, tissue clearing and light-sheet microscopy, we studied plaque formation in the intact AD mouse brain and up to twenty-seven months of age. We visualized amyloid plaques in 3D together with tau, microglia and vasculature. Volume imaging coupled to automated detection and mapping enables precise and fast quantification of plaques within the entire intact mouse brain. The present methodology is also applicable to analysis of frozen human brain samples without specialized preservation. Remarkably, amyloid plaques in human tissues showed greater three-dimensional complexity and surprisingly large three-dimensional amyloid patterns or TAPs. The ability to visualize amyloid in 3D, especially in the context of their micro-environment, while simultaneously analyzing two other markers, and the discovery of large TAPs, may have potentially important scientific and medical implications.