Objective: The present study aimed to examine whether the relations between treatment targets of the Cognitive Behavioral Analysis System of Psychotherapy (CBASP), childhood trauma, and symptoms of persistent depressive disorder (PDD) change after treatment with CBASP compared to non-specific Supportive Psychotherapy (SP) in patients with PDD. Method: We conducted a Bayesian network analysis with data from a randomized controlled trial. In this trial, 268 chronically depressed patients received either treatment with CBASP or with SP. Networks including “childhood trauma”, the treatment targets “interpersonal problems” and “social functioning”, and “PDD symptoms” were compared before and after treatment and between treatment groups. Results: The majority of the analysis sample (N = 232) was female (65.5 %) and the mean age was 45 years (SD = 12.11). The networks of both treatment groups at both time points showed similarities in terms of the network structure and the strength estimates of each variable. Thus, the netwoks did not markedly changed after the treatment. The treatment targets “interpersonal problems” and “social functioning” were highly related to each other and to depressive symptoms. “Childhood trauma” had the fewest connections to other variables in most networks. Conclusions: The results offer initial evidence for the hypothe-sized associations of the theory behind CBASP. “Interpersonal problems” and “social functioning” related directly and indirectly to depressive symptoms and may, therefore, be appropriate treatment targets.