The use of genetically modified crops has seen a great increase in the agriculture and food industry. Thus, genetic engineering is used to improve some characteristic of the original crop such as its resistance to plagues, pesticides, and extreme environmental conditions, to provide better nutritional properties. 1,2 In spite of the aforementioned advantages, the use of genetically modified organisms (GMOs) in agriculture and food science is not commonly accepted in many countries. 3 Thus, different ecologist groups support international campaigns against the use of this kind of products, claiming their negative impact on human health, on the environment, or both. 4 On the other side, biotechnology companies point out the potential benefits for the agricultural and food industries and for the general public as well as the lack of scientific evidence of their threat for the human health. 5 This situation has led to the implementation in some countries of different regulations regarding the development, growing, and commercialization of genetically modified products. 6,7 As a consequence, at present, research on how the different genetic modifications can impact on the chemical composition of these products is of great interest. In this regard, a mixed strategy is usually carried out by the biotechnology companies and regulatory laboratories to assess the safety equivalence between transgenic and parental nontransgenic organisms (maize or soy, for instance) including field investigations, animal nutrition, and basic chemical composition studies. However, it has repeatedly been demonstrated that these strategies are not very useful to detect unexpected modifications in GMOs. 8 Moreover, the mentioned strategies devised to study the nutritional, safety assessment, and chemical composition of the first GMOs generation will be much more difficult to apply to the coming new generation of GMOs in which significant changes in other constituents have been deliberately introduced (e.g., increased fatty acids or amino acid content, polyphenols, vitamins, and reduced undesirable constituents), requiring the development of more powerful and informative analytical procedures. 9-11 * Corresponding author. E-mail: acifuentes@ifi.csic.es.