Arbuscular mycorrhiza (AM) fungi deliver mineral nutrients to the plant host in exchange for reduced carbon in the form of sugars and lipids. Colonization with AM fungi upregulates a specific host lipid synthesis pathway resulting in the production of fatty acids. The fungus Rhizophagus irregularis accumulates predominantly palmitic acid (16:0) and the unusual palmitvaccenic acid (16:1 Δ 11cis). Here, we present the isolation and characterization of RiOLE1-LIKE, the desaturase involved in palmitvaccenic acid synthesis, by heterologous expression in yeast and plants. Results are in line with the scenario that RiOLE1-LIKE encodes an acyl-CoA desaturase with substrate specificity for C15-C18 acyl groups, in particular C16. Phylogenetic analysis of RiOLE1-LIKE related sequences revealed that this gene is conserved in AM fungi from the Glomales and Diversisporales, but is absent from non-symbiotic Mortierellaceae and Mucoromycotina fungi, suggesting that 16:1 Δ 11cis provides a specific function during AM colonization. Δ 11cis is absent from plants. It accounts for 46 -78 mol% of total fatty acids in spores of AMF of the Glomales including the families Acaulosporaceae, Glomaceae and Gigasporaceae, albeit some species of Glomaceae (Glomus leptotichum, Glomus occultum) and Gigasporacea (Gigaspora albida, Gigaspora gigantea, Gigaspora margarita, Gigaspora rosea) contain no or traces of 16:1 Δ 11cis . In addition to 16:1 Δ 11cis , Rhizophagus irregularis, Glomus claroideum and Gigaspora roseae spores and hyphae contain 0.2 -3.3 mol% of 16:1 Δ 9cis (palmitoleic acid; 16:1 ω 7cis ). Glomaceae species lacking 16:1 Δ 11cis (Glomus leptotichum, Glomus occultum) instead contain considerable amounts (11 -55 %) of 16:1 Δ 9cis . Spores of Gigaspora spp. with low amounts of 16:1 Δ 11cis contain high contents (38 -48 %) of 18:1 Δ 9cis (oleic acid) and 8 -15 % of 20:1 Δ 11cis (gondoic acid) [12]. Oleic acid and gondoic acid are present in low amounts in spores of R. irregualris and other Glomaceae [11,12]. Experimental Phylogenetic analysis For retrieving the desaturase sequences from R. irregularis, the four characterized Mortierella alpina desaturase sequences were retrieved from UniProtKB (uniprot.org) and used in BLASTp searches at the EnsemblFungi database (fungi.ensembl.org). For phylogenetic analysis of desaturases in symbiotic and non-symbiotic Mucoromycota, RiOLE1 and RiOLE1-LIKE sequences were used in BLASTn searches to identify orthologs in Gigasprora rosea, Rhizophagus cerebriforme and Rhizophagus diaphanus genomes available at MycoCosm [25]. Rhizophagus clarus, Mortierella circinelloides, Rhizophagus microsporus, Mortierella elongata and Lobosporangium transversale genomes at EnsemblFungi were surveyed for RiOLE1 and RiOLE1-LIKE orthologs using BLASTp. The sequences for phylogenetic analyses were aligned using MUSCLE implemented in MEGA 7, and the alignments used to create a maximum-likelihood tree with the WAG +F nucleotide substitution model. Gamma distributed rates with invariant sites (G+I) and 1000 bootstrap iterat...